Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
okr (FBgn0002989) cofactor
 
(-0.81/-3.67/-0.10)

Factor activity

Additional information

okr [FlyBase] | okr [FlyMine] | okr [BDGP]

H. sapiens orthologues1

RAD54L (HGNC:9826, ENSG00000085999)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCGGCGCAGTCTGGCTCCCAGCCAACGTGGACCACTGCGTCCCGAGTCCCGTCACTCCTTCACGCCGCCACTGCTGAAGAAAAACAAGCGATCCTGCCAGCAGGAACTGGAGCGAGAGCAAGAACTGGACAGAAGACGACTGGGCGCCCTCCGAGATGCCAGCAACACATCAGAGCTCCCACTGCCTATTCGCTTCACGGCGAACAGCGAGTATGAGTTGGCCATTGCCAAGGTTCTGGCACGGAAGTTCAAGGTGCCCATGGACAATTACGTACCGGATTACGGTGGTAAACGGGTCCTGGGCGTGCGGCGCTGCATTTCCCGACGACCCCTACACGATCCGATGGCCTGCAACGCCTTGGTACTCTTCCATCCACCCGCCTACACAGAACACGAGCGCATGGGCATGGATCCGACCAAGGTTCTGGTGCACGTCGTCGTCGATCCGCTGCTGAGCAACATATTGCGGCCGCACCAGCGCGAGGGAGTGCGTTTCATGTACGAGTGTGTGGAGGGAAAGCGGGGCAACTTCAATGGATGCATCATGGCCGACGAAATGGGTCTCGGGAAGACGCTGCAGTGCGTAACGCTGGTCTGGACACTTCTAAGGCAGGGGCCCGAGTGCAAGCCGACGATCAACAAAGCCATTGTCGTGTCTCCATCATCGCTGGTTAAGAACTGGGAGAAGGAGTTTACCAAGTGGCTTCACGGTCGACTCCTTTGCCTGCCCATGGAGGGCGGGACCAAGGAGAACACCATCCGAGCACTCGAGCAGTTCTCCATGACTTCTGCCCGGCTGGGGACACCTGTTCTGCTCATCAGCTACGAGACATTTCGCATCTACGCGGAGATCCTGTGCAAGTACGAGGTGGGAATGGTGATATGCGACGAGGGACATCGCCTCAAGAACAGCGACAATCTGACGTATCAGGCTCTCATGGGACTGAAGACAAAGCGACGGGTCTTGCTTTCCGGCACTCCCATCCAGAACGATCTTACTGAGTACTACAGCCTGGTGAACTTTGTAAACCCGGAGATGCTGGGAACGGCGGCCGTGTTTAAGCGCAACTTCGAGAGCGCTATTCTGCGGGGCCAGAATACTGACTCCACGGAACAGGAGCGACAACGGGCCATAGAGAAGACACAGGAGCTGATAGGTCTGGTCGATCAGTGCATCATTCGTCGCACTAATCAAATTCTAACCAAATATCTGCCGGTTAAGTTTGAAATGGTTATCTGTGCGAAACTGACGGCGATTCAACTCGAGCTATACACGAATTTCTTGAAGTCTGATCAAGTTCGACGTAGTTTGGCGGATTGCAATGAAAAGGCTTCGCTTACGGCGCTGGCAGACATTACAACGCTTAAGAAGATTTGCAGTCATCCGGATCTCATATATGAGAAGCTCACTGCGCGGGAAAAGGGATTCGAAAACTCCCAAAATGTGCTGCCTAGTAATTACAAACCAAAGGATCTCAATCCAGAGCTAAGTGGCAAGTTCATGCTCCTGGATTTCATGCTGGCAGCAATACGTGCAGAGGGCAACGACAAGGTGGTTCTCATTTCCAATTACACACAGACCCTGGACTTGTTCGAGCAGCTCGCGAGGAAGCGAAAGTACGGATTTGTCCGGCTTGATGGCACCATGTCCATCAAGAAGCGATCGAAGGTTGTTGACCGATTCAATGACCCGGAGTCTGACAGCTTCCTTTTCATGCTGAGCAGCAAGGCTGGCGGCTGCGGCTTGAATTTGATTGGAGCCAACCGCCTGTTCATGTTTGACCCAGACTGGAATCCGGCCAACGATGAGCAGGCAATGGCCAGAGTGTGGCGTGACGGGCAAAAGAAGCCCTGTTACATATATCGCCTCGTTGCTAGTGGTTCCATCGAGGAGAAGATCCTGCAGCGACAGACGCACAAAAAATCCCTGTCGAGCACCATCATTGACAACAACGAGTCGGCCGAGAAGCATTTCACCCGCGACGATCTGAAGGACTTGTTTACATTTGATGCGAACATTCTGTCCGACACACACGACAAGCTCAAGTGTAAGCGCTGCGTTCAAAATATACAAATGAAGCCACCGCCCGAGGACACGGACTGCACCTCGCATTTGTCACAATGGTACCATTGCTCCAACAACAGAGGCCTGCCTGACAATATTCTCGCCCAGGCCTGGATGGATTGCAAGTGCGTGTCCTTTGTCTTCCACCACCGATCGCAGGCTCAGGAAATTGTGCCGAGTGCTGAGGAGGAAGCAACAGATCAGCCAGAGGAAAAACCAGAAAGCCGCAAACGATCATCCACGCCCGCCAGTGATGACAGTGCCGATGAGGACTTCCGTGGATTC

CDS AA Sequence2

MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPESRKRSSTPASDDSADEDFRGF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.