Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
TFAM (FBgn0038805) TF
 
(-0.25/-1.83/0.39)

Factor activity

Additional information

TFAM [FlyBase] | TFAM [FlyMine] | TFAM [BDGP]

H. sapiens orthologues1

TFAM (HGNC:11741, ENSG00000108064)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGATCTACACCACAACACTGATGTCCTCGCGCGGCGGCCTCATCGGCTCGCTGATCAACAAAGTCAGGCCCCTAGCAGCCGCCAGCATCAGCAACACTCCGGCGGTGCCGTCGAAGACCCTGGAGGAGCAGTTGGGCCTGCCGCCGCGACCAAAGAAACCGCTGACTCCCTACTTTCGCTTCATGCGGGAGCAGCGGCCCAAGCTGAAGGCTGCCAATCCCCAGATTACCACCGTCGAGGTGGTGCGCCAGCTGTCTAAGAACTGGTCCGATGCCGATGCGCAGCTGAAGGAGCGCCTGCAGGCCGAGTTCAAGCGGGACCAACAAATCTACGTGGAGGAGCGAACAAAGTACGATGCCACACTCACGGAGGAGCAGCGGGCCGAGATCAAGCAGCTCAAGCAGGACCTCGTTGACGCCAAGGAGCGCCGCCAGCTGCGCAAGCGGGTCAAGGAGCTGGGGCGACCCAAAAAGCCCGCTTCGGCCTTCCTGCGATTCATCGCCAGCGAACGTATCAACACTCCGCAGGGCGACAAGCAAACCTACCGCGAGTGGCACCAAAAGACCACCGCCAAGTGGACTCGCCTTTCCGACTCCGAGAAGGAGGTCTACATGCAGGAGTCGCGCAAGGAGATGGAGCTCTACAGGAAAGCGATTTCCGTTTGGGAGGAGAAGATGATCCGCCTGGGCCACATCGACGTGGTGCGTCACGGAAATCTTATCGATCCACCTGAGCCAAAGCCCCGCAAGACGCTGGCCTCCAAAGATATA

CDS AA Sequence2

MIYTTTLMSSRGGLIGSLINKVRPLAAASISNTPAVPSKTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRLGHIDVVRHGNLIDPPEPKPRKTLASKDI

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.