Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
ebi (FBgn0023444) cofactor
 
(-0.55/-3.00/-0.03)

Factor activity

Additional information

ebi [FlyBase] | ebi [FlyMine] | ebi [BDGP]

H. sapiens orthologues1

TBL1X (HGNC:11585, ENSG00000101849), TBL1Y (HGNC:18502, ENSG00000092377), TBL1XR1 (HGNC:29529, ENSG00000177565)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAGTTTTTCCAGCGACGAGGTGAACTTTCTGGTTTACCGATACCTGCAGGAGTCGGGCTTTCTGCACTCGGCCTACGTGTTTGGCATTGAGTCACACATCTCGCAAAGTAATATCAATGGCGCATTGGTTCCACCTGCCGCTTTGCTCACCATCCTGCAGAAGGGTCTTCTGTACACTGAAGTGGAGTGGAGCGTAGGCGAAGACGGCGAGGTGGCGCGACCCATTGAAGGACTCTCTCTAATAGACGCTGTCATGCCGGAGGTGAAGCCACTCAAGCCCATTGTGAAAACAGAGCCGGGAAAACCCGGGGCAGTCGACTCTTCTGCCCCTGCCGGTGGCAACCAGAACAACAATGCCAAGCCTGAGATAAAAATAGAACCGGGTACCGGAGTGGCGGGCTCAGCAGGTGGAAACAAAATTGCTGGCAGCACCACGGGCACAAGCACACCAACCGATCAGTCGGCAAGCGAGGTAGACTCCAGTGGAAATGCGGCAAATAATGCTGGCGGCACATACGCCGGAAACAATGGAGCTGGAGGGAACCAGGCCAGTACTGGAGGATCTAATAGCACAAGCACACCAGCTGGTGGAGATTTGGCAGCACCTGGGGCAAGTCAAAAGAAATCCCAGAACTCGAATGAAGCGGGAAGCTCATCTAGTGGCAATGCAGGCAATGCAAATGCTACCAGTACCGATGATGCAGCCTCCTCAACATCCACAAATGGCAATAGCAGCACTTCCAGCAGCGTAGAACAACCTACAAGCGGGCTGACGCCCGCTGGTGGAACTGTATCAACCTCCAATCCGGACGCAGCAGCATCGGGCGGAGCTTCGACTGCAACAGGATCAAAGGCGCCAAGTGGAGCGGTTACGATTCGCGTAGGAGCCCAAGGAAACAACGTGCAGTCTGGTTCGTCCAATGCTCAAAGCTCTGCTCCCAGTGGAACCATCTCCTCGTCTACCAGCGGAGGTGCTGGGACTCCCGCAGCTCTTGTTCCCATGGACATTGACGAGAACATCGAAATACCCGAATCCAAGGCTCGTGTATTACGCGGCCACGAAAGCGAGGTGTTTATCTGCGCATGGAATCCTAGCCGGGATTTACTGGCAAGCGGTTCGGGAGACAGCACTGCTAGGATATGGGACATGTCCGATGCAAACACTAACTCCAACCAGTTGGTGCTGCGCCACTGCATCCAGAAAGGCGGCGCTGAGGTGCCTAGCAACAAGGACGTCACCTCTCTGGACTGGAATTGCGATGGTTCCTTGCTCGCCACCGGCAGCTACGATGGTTACGCCCGAATTTGGAAAACCGACGGTCGACTTGCTTCTACTTTGGGACAACACAAGGGTCCGATCTTTGCTCTGAAGTGGAACAAGTGCGGCAACTACATCCTCTCGGCTGGCGTGGACAAGACGACGATCATCTGGGACGCATCCACGGGCCAATGCACCCAGCAATTTGCCTTTCACAGTGCTCCAGCCTTGGATGTGGACTGGCAGACAAACCAGGCCTTTGCCTCTTGCAGTACGGATCAGCGGATACATGTGTGCCGGTTGGGTGTAAATGAACCCATCAAGACCTTTAAAGGACACACAAACGAGGTGAATGCAATCAAGTGGTGTCCGCAGGGCCAACTGCTGGCGTCCTGCTCTGATGACATGACCCTCAAGATCTGGAGCATGAACCGAGATCGTTGCTGCCACGATCTGCAGGCTCACTCAAAGGAGATCTATACGATAAAATGGTCGCCCACGGGGCCGGGAACCAATAATCCAAACACAAACCTGATCCTCGCATCCGCTTCGTTCGATTCCACGGTAAGACTGTGGGACGTGGAGAGGGGCAGCTGTATCCACACGCTCACCAAGCACACAGAGCCAGTCTATTCGGTGGCCTTCAGTCCGGATGGAAAGCATTTGGCCTCCGGCAGCTTCGACAAGTGCGTACACATTTGGAGCACGCAAACGGGACAGCTAGTGCACAGTTACAAGGGCACGGGCGGAATCTTTGAGGTGTGCTGGAACTCCAAGGGCACTAAGGTGGGTGCCAGTGCCTCCGACGGTAGCGTTTTCGTGTTGGACCTGCGAAAGTTC

CDS AA Sequence2

MSFSSDEVNFLVYRYLQESGFLHSAYVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWSVGEDGEVARPIEGLSLIDAVMPEVKPLKPIVKTEPGKPGAVDSSAPAGGNQNNNAKPEIKIEPGTGVAGSAGGNKIAGSTTGTSTPTDQSASEVDSSGNAANNAGGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGNAGNANATSTDDAASSTSTNGNSSTSSSVEQPTSGLTPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSGGAGTPAALVPMDIDENIEIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLRKF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.