Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
C15 (FBgn0004863) TF
 
(-0.74/-3.69/0.22)

Factor activity

Additional information

C15 [FlyBase] | C15 [FlyMine] | C15 [BDGP]

H. sapiens orthologues1

TLX3 (HGNC:13532, ENSG00000164438), TLX1 (HGNC:5056, ENSG00000107807), TLX2 (HGNC:5057, ENSG00000115297)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCCAGCCACGAGGAGGATGACCATGAGCACGAGAACGAGCACGGCGAAGAGGTGGAGGAACAGGAGATCCACGTGGATGTGGACTCGGACTCGCGGATGTCATGTGGCAGCGGATCCGATGTGGATATGGACGGCGGCAGCTGCTACGACGAGTCCGAAACGCCATTGAGCGAGTCCCTGCAGTCGGAGCAGACGCGCTCCTCGTCCAGTGAGAATCTGCCCTTCAGCATATCACGCCTGCTATCCAAGCCCTTCGAGACGAGTCACCACCACCACAACAACAACAACCACCTGCTCAGCAGCAGTCCGGGCTCCAGCAGCAACAACAACAACAGCGGCGAAAAGGGCGAGGAGAAGGAGCTACTGCAGCAGGAGGACCACGACCTGGCCTATAAGCTGGCCACCAGCATCGCCAACTCGACATACGGAAGCGCCGCAGCACTATACTCGTATCCGCATCTCTATCCCTCAGCGGCCGGCGGTCATGTGCTACGTGTACCGCCCCAGAGAACGCCGCTCACCTGGGCACTACCGCCACTGCATCACGCGGCGCTGGCACATCAGGCGGTCAAGGATCGGTTGGCAGCTGCCTTTCCGATCGCCCGACGGATCGGACATCCCTACCAGAATCGCACGCCGCCGAAGAGGAAAAAGCCACGCACATCCTTCACGCGCATCCAGGTGGCCGAGTTGGAGAAGCGCTTCCACAAGCAAAAGTATCTGGCATCCGCGGAGCGAGCGGCACTGGCCCGCGGACTGAAGATGACCGATGCCCAGGTGAAGACGTGGTTCCAGAACCGACGCACCAAGTGGAGACGACAGACGGCCGAGGAGCGCGAGGCGGAGCGGCAGGCGGCGAACAGACTGATGCTGTCCCTCCAGGCGGAGGCCATCAGCAAGGGATTCGCGCCTCCTTCGGCACCCCTGGGTTCCCAGGGGGGCGTGAACGGGGCACCGCTGGCTGCGTTGCACGGACTACAGCCGTGGGCAGAGGCGTCGCATGCGGCGGGCTGC

CDS AA Sequence2

MSSHEEDDHEHENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPLGSQGGVNGAPLAALHGLQPWAEASHAAGC

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.