Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
HLH4C (FBgn0011277) TF
 
(0.59/-0.43/2.41)

Factor activity

Additional information

HLH4C [FlyBase] | HLH4C [FlyMine] | HLH4C [BDGP]

H. sapiens orthologues1

LYL1 (HGNC:6734, ENSG00000104903), TAL1 (HGNC:11556, ENSG00000162367)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGTCTACGATATGAGCCATATGGCGGCGGGTCCGCCGCAAAGCATTTCGCTTAGTCGCTACTATCTGGTCGACGATGATGAGATGATTGGGCCAAATAATCCGCATCTGGTCAACGAGGACTATGCGGCCAGTACGACGCTGGATATCGATAAGCGTTTTCAGGCGCGAATGGCGTGCGAAACGGCCGCACAACCGGCACCGCCACCGCCGCCCACGCCGGCGCCACGTCGCCGGACCACGCCCATTGCCCATTTGGATCCATCGGAATTGGTGGGTCTATCGCGGGAGGAGCGGCGTCGTCGCAGGCGAGCGACACTCAAATACCGAACGGCACATGCGACGCGGGAGCGTATACGGGTGGAGGCATTCAATGTTTCCTTTGCCGAGCTGCGCAAGCTGTTGCCCACATTGCCGCCGGACAAGAAGCTTTCCAAGATCGAGATCCTCAAGCTGGCCATCTGCTACATTGCCTATTTGAATCATGTGCTGGAGACGCCC

CDS AA Sequence2

MVYDMSHMAAGPPQSISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDIDKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLETP

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.