Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG17446 (FBgn0030121) cofactor
 
(-0.44/-2.21/0.06)

Factor activity

H. sapiens orthologues1

CXXC1 (HGNC:24343, ENSG00000154832)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGACGGACAAGCGCAAATATAAGAAGACCAAAGAGGAAATCAGGCGGGAGATCGCACGGGAATTTGATTTGCCTGAGCGCAAGTCCAAGATAGCCACCATTCTAAAGCAGGAAGACCAAGCGTACTGCATATGCCGCTCCTCCGACTGCTCCAGGTTCATGATAGGCTGCGATGGTTGCGAGGAGTGGTACCACGGCGACTGTATAGGGATCACCGAGAAGGAGGCTAAACACATCAAACAGTACTACTGCCGGCGCTGCAAAAAGGAGAATCCCGAACTACAAACCATATTCCGCCTGGTGGCCACCGAACGGGCAGCCGCATCGAACGCCGCCTCTACAAGTCTCAATGCCCCGGGCGTAGGTCCATCGGGAGCTGCGCCTGCTGCTGCACCGGTGGCGCCCGCAACAACCAGCCAGCAAGCGCCGCCACCGACCACTGCGGCAGCGAAGCGCAAAAACAGCAGCGCCCGAGAACCAAAGATGGGCAAACGTTGTGGTACCTGTGAGGGATGCCGGCGTCCCAATTGCAACCAGTGCGACGCGTGCCGCGTTCGCGTGGGCCACAAGCCGCGCTGCATATTCCGCACCTGCGTTGTCCAGGCGGCGACGGTCTTAAAGGAGTCGCAGGCAACTCAAGCCGGCCCAAGTAGGAAGCGGGAAAAGGCGGCACCCAAGAGTCGCAATGTCCAAGTGGGCCCGCGGGCGGCCAGTCCGGAGATATTCCTCAATCCGGAGCTACAAGGCATCCGGCAGTGCTACGGACCCAATTGCTGCTCCCATGCGAGACCGCAGAGCAAGTACTGCAGCGATAAGTGTGGCTTCAATCTGGCCACAAAACGCATCTTCCAGGTTCTGCCGCAACGACTGCAAGAGTGGAATCTAACGCCCAGCCGCGCCGCCGAGGAAACACGCAAGCATCTTGATAACATTCGTCATAAGCAGTCCCTGGTGCGTTTCGCACTTGCCGAGCTAGAGAAGCGCTCCGAAGAGCTCAACATGGTGGTGGAGCGAGCCAAACGAAGCTCCATTGATACATTGGGGTCACAAGACACCGCCGACATGGAGGACGAACAGAGCATGTACTGCATCACCTGTGGCCACGAGATTCACTCGCGCACTGCCATCAAGCATATGGAGAAGTGCTTCAACAAATACGAATCGCAGGCCAGCTTCGGGAGCATATTCAAAACGCGAATGGAGGGAAACAATATGTTTTGTGATTTCTACAATCCGGCAAGTAAGACTTACTGTAAGCGATTGAGAGTATTGTGTCCGGAGCACAGCAAGGATCCGAAGGTGAACGATACGGATGTGTGTGGTTCGCCCTTAGTGAACAACGTCTTCAATCCCACGGGCGAGTTTTGTCGTGCGCCAAAGAAGAATTGCTTCAAGCACTACGCCTGGGAGAAGATCCGGCGTGCTGAGATAGATCTGGAGCGTGTGCGTCAATGGCTCAAGATGGACGACCTGATGGAGCAGGAGCGCGTGATGCGGCAGCAGCTCACCTCGCGAGCGAACCTGCTCGGCCTGATGCTGCACTCCACCTACAACCACGAGGTGATGGACGAGCTGGTGCGCAAACAGCAGGAGCATCTGGTAGAGTTCGAGAAGCAGAGGCGACGCCTGGCTCACCAGCAACAAATACAAACACAGCAGAAACAGTACCAGGAAAAGCAGAAGCTAATGTTGCAGCAACAACAGCAACAGCAACAACAGCAGCAGCAACAACAACAGCAGCAACAACAGCAGCAGCTGCAACAACCACAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAGGAGCAACAGCAACTGCAATTGAAGCCACATCATCTGCAGCAACTTCAACTTCAACTGTTGCAGCAGCAGCAAAAGAAGGCCCAAATACCACAGAAAACTCAAATTATATACCTGCAGAAAAAAACA

CDS AA Sequence2

MTDKRKYKKTKEEIRREIAREFDLPERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTIFRLVATERAAASNAASTSLNAPGVGPSGAAPAAAPVAPATTSQQAPPPTTAAAKRKNSSAREPKMGKRCGTCEGCRRPNCNQCDACRVRVGHKPRCIFRTCVVQAATVLKESQATQAGPSRKREKAAPKSRNVQVGPRAASPEIFLNPELQGIRQCYGPNCCSHARPQSKYCSDKCGFNLATKRIFQVLPQRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKRSEELNMVVERAKRSSIDTLGSQDTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKTRMEGNNMFCDFYNPASKTYCKRLRVLCPEHSKDPKVNDTDVCGSPLVNNVFNPTGEFCRAPKKNCFKHYAWEKIRRAEIDLERVRQWLKMDDLMEQERVMRQQLTSRANLLGLMLHSTYNHEVMDELVRKQQEHLVEFEKQRRRLAHQQQIQTQQKQYQEKQKLMLQQQQQQQQQQQQQQQQQQQQQLQQPQQQQQQQQQQQQEQQQLQLKPHHLQQLQLQLLQQQQKKAQIPQKTQIIYLQKKT

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.