Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
bs (FBgn0004101) TF
 
(-0.76/-2.04/-0.15)

Factor activity

Additional information

bs [FlyBase] | bs [FlyMine] | bs [BDGP]

H. sapiens orthologues1

SRF (HGNC:11291, ENSG00000112658)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGATCCGACGCGAGGTGACTCGCGGTACAATCTCAACTACTCGATGAGTAGCATAGGGCTGAGCCTGGCGGATCCGGCGGACATGTACGGCAACCCGGCCCTGGGGGCGGGCCGCCCGCCCTCCGGTGGCCTGCTCCAGAACATGGGCGGCGTTCCGCCGATGCAGCGCCCCAATCCCGCGGCAGGAGCACCCCCTGCCCCGCAGTGCCAAACGCTCCACAGCCCACAGCACGCCTCCCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAACACCAGCAGCAGCAACAACAGCAGCAGCAGCATCCCCAGCAGCAACGCGGCCTTAAGCGCTCCGGCAGCGACTGCTACGAGGATCACCACCGCTCGTCCGGCGGACTCACCCTCCAAGGACTGGACAACGTGGCCAGCGGAGCCGTCGACGACAGCGTAGACAACTACAACCCGCTGCCCAACAAGAAGTCTCCGCCTGCCAACGGCAAAAAGACAAAGGGACGTGTCAAAATCAAAATGGAATACATCGACAATAAGCTGCGTCGCTACACGACCTTCTCCAAGCGCAAGACGGGCATAATGAAGAAGGCCTACGAGCTGTCCACGCTGACCGGGACGCAGGTGATGCTGCTGGTGGCCAGCGAGACGGGCCACGTGTACACATTTGCCACGCGCAAGCTGCAGCCGATGATCACCTCGGAGGCGGGAAAGCAGCTCATCCAGACCTGCCTCAACTCGCCGGATCCGCCCAGTGTGGGCGGCGGCGACCAACGGATGTCGGCCACCGGGTTCGAGGAGACGGAGCTCAGCTACAACATCGCCGACGAGGACTCGAAAGATGACCGATCGCCTACCTCGTCGGGCAACGAGTCGGATGATTCGTCGGACGTGGAGATGCCGGCGGAGGCTGCTGAGGTGGCAACCAAGTTGCCGGCCAGCAAAACAGAGGTATCAGCGCCTCCAGCAGCCTCATGCTCGGCGGCCACCGCTTCCTCTGGCCACAAAACCATGCCAGCATTGAACTATCAGACTGACACCAACAGCGGACCCTCAACGTCCACCGCCGCCGGAGGAGGAGGCTCGGCGGACAGCAAGTACGTCTACTCCGCTGCCTCGATTGCCAACATACCGCAGAAGATGCTGAGGCAGCTCATCCAGTCAGGCCACTTGCAGGTGCACGCCGAAGAGGATGGCAACCAGTATGTGACCATACCGCTCAGCTCCACAGCAGCCAATCTGATAAAGAGCAATAAGCTAACAGCCTCTGGATCAGGAGCCTCAGGATCGGGAACGCCCGTCAAGAACGATGCCAGTGCCGATAAGCCCTTGACCATCAAACAGGAGTTCGAT

CDS AA Sequence2

MDPTRGDSRYNLNYSMSSIGLSLADPADMYGNPALGAGRPPSGGLLQNMGGVPPMQRPNPAAGAPPAPQCQTLHSPQHASQQQQQQQQQQQQHQQQQQQQQQHPQQQRGLKRSGSDCYEDHHRSSGGLTLQGLDNVASGAVDDSVDNYNPLPNKKSPPANGKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGGDQRMSATGFEETELSYNIADEDSKDDRSPTSSGNESDDSSDVEMPAEAAEVATKLPASKTEVSAPPAASCSAATASSGHKTMPALNYQTDTNSGPSTSTAAGGGGSADSKYVYSAASIANIPQKMLRQLIQSGHLQVHAEEDGNQYVTIPLSSTAANLIKSNKLTASGSGASGSGTPVKNDASADKPLTIKQEFD

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.