Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
srp (FBgn0003507) TF
 
(-1.15/-2.80/0.51)

Factor activity

Additional information

srp [FlyBase] | srp [FlyMine] | srp [BDGP]

H. sapiens orthologues1

None.

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCAGTCCCCCAACCAAACACAAGCCCATCTCCAGCAGCAGCACCATCAGCAGCAGCAGCAACAACATCAGCAACACCAGCAGCAGCAACTGCAGCAGCAGCAGCAGCAACATCACCACAATCAACACCAGCACCACAACTCCAGCAGCAGCAGTCCGGGGCCAGCGGGTCTGCACCACTCGAGCTCCTCGGCGGCCACGGCGGCAGCGGTGGCTGCGGCAACGGCGGCGGTCAATGGACACAACAGCTCCTTGGAGGACGGCTACGGATCGCCAAGGAGCAGCCACAGTGGCGGCGGGGGCGGTGGTACTCTGCCAGCCTTCCAGCGGATCGCATACCCCAACAGTGGCTCCGTGGAACGTTACGCTCCGATAACCAATTATCGCGGTCAGAACGATACCTGGTTCGATCCGTTAAGCTACGCCACCTCCTCTTCCGGGCAGGCGCAGTTGGGCGTCGGTGTTGGAGCCGGAGTGGTCTCGAATGTGATACGGAATGGGCGGGCCATTTCGGCTGCTAATGCAGCAGCTGCAGCCGCCGCGGATGGAACCACTGGACGCGTAGATCCTGGAACCTTTCTCTCCGCCTCGGCATCGTTGTCAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAACCCAACTCATTTAATGTGGGCGGCGGTGGCCGTAGTAAGGCTAACACGAGTGGTGCCGCCAGCTCCTACTCCTGTCCAGGCTCGAATGCAACCTCGGCGGCGACTTCGGCGGTGGCGTCGGGAACGGCAGCAACTGCAGCGACGACGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCAAAGCGAGCCGGACTTTCCTGCTCCAACTGCCACACCACCCACACTTCGTTGTGGCGCCGCAATCCCGCCGGAGAGCCCGTCTGCAATGCATGCGGCCTGTACTATAAGCTCCACAGTGTCCCACGGCCACTGACCATGAAAAAGGACACCATTCAGAAACGCAAGCGCAAGCCGAAAGGAACGAAGAGCGAGAAGTCCAAGTCAAAGTCAAAGAACGCTTTGAATGCCATCATGGAAAGTGGTTCATTGGTGACCAATTGCCATAACGTTGGTGTCGTCCTGGACAGCAGCCAGATGGATGTCAATGACGATATGAAACCACAGCTCGATCTGAAACCATACAACTCATACTCATCGCAGCCGCAGCAACAGCTTCCACAGTACCAGCAGCAGCAGCAGCTGCTAATGGCTGATCAGCACTCATCGGCGGCCAGCTCGCCCCATAGCATGGGTTCCACCTCATTGTCGCCATCAGCCATGTCACATCAGCATCAGACTCATCCACATCAGCAGCAACAGCAGCAGCTCTGTTCCGGGCTGGACATGTCGCCCAACTCAAACTACCAAATGTCGCCGCTCAACATGCAGCAGCATCAGCAGCAGCAATCGTGCAGCATGCAGCACTCACCCAGCACACCCACATCCATCTTCAACACCCCATCGCCAACTCACCAGCTCCACAATAACAATAACAACAACAACAACAGCTCGATCTTCAACAACAACAACAACAACAATAGTAGTAGCAATGAGAATAACAACAAACTTATACAGAAATATCTGCAAGCTCAGCAACTGAGCAGCAGCAGCAACAGCGGCTCCACCAGCGACCACCAGTTGCTGGCCCAACTGCTGCCGAACTCCATTACGGCGGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGGCGGCGATCAAGACGGAGGCCTTGTCGCTCACCTCCCAGGCCAACTGCTCCACAGCGTCGGCGGGACTTATGGTCACCTCAACACCGACCACGGCATCGAGCACATTATCGTCCCTGAGTCACAGCAACATTATTAGTCTGCAGAATCCGTATCACCAGGCCGGAATGACGCTGTGCAAGCCCACGAGACCTTCCCCACCCTACTACCTGACTCCGGAGGAGGATGAGCAGCCCGCTCTCATCAAGATGGAAGAGATGGATCAGTCGCAACAGCAACAACAGCAGCAGCAGCATCAGCAGCAGCAACATGGAGAGATAATGCTCAGCCGATCGGCCTCGCTGGACGAGCACTACGAACTGGCCGCCTTCCAGAGACATCAGCAGCAGCAGCAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCATGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGGTGAAGATGGAG

CDS AA Sequence2

MQSPNQTQAHLQQQHHQQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSSSSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPRSSHSGGGGGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDTWFDPLSYATSSSGQAQLGVGVGAGVVSNVIRNGRAISAANAAAAAAADGTTGRVDPGTFLSASASLSAMAAESGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKNALNAIMESGSLVTNCHNVGVVLDSSQMDVNDDMKPQLDLKPYNSYSSQPQQQLPQYQQQQQLLMADQHSSAASSPHSMGSTSLSPSAMSHQHQTHPHQQQQQQLCSGLDMSPNSNYQMSPLNMQQHQQQQSCSMQHSPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKLIQKYLQAQQLSSSSNSGSTSDHQLLAQLLPNSITAAAAAAAAAAAAAIKTEALSLTSQANCSTASAGLMVTSTPTTASSTLSSLSHSNIISLQNPYHQAGMTLCKPTRPSPPYYLTPEEDEQPALIKMEEMDQSQQQQQQQQHQQQQHGEIMLSRSASLDEHYELAAFQRHQQQQQQLQQQTAALLGQHEQHVTNYAMHKFGVDRETVVKME

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.