Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
mbf1 (FBgn0262732) cofactor
 
(0.03/-3.11/1.18)

Factor activity

Additional information

mbf1 [FlyBase] | mbf1 [FlyMine] | mbf1 [BDGP]

H. sapiens orthologues1

EDF1 (HGNC:3164, ENSG00000107223)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCGGACTGGGACTCTGTGACTGTTCTTCGGAAGAAAGCACCGAAATCGTCGACCCTCAAGACGGAATCGGCGGTCAACCAGGCACGCCGTCAAGGAGTCGCCGTGGATACCCAACAGAAGTATGGTGTTGGCACCAACAAGCAGCATGTGACCACCAAGAACACTGCCAAACTAGACCGCGAGACCGAGGAGCTGCGCCACGACAAGATTCCCCTCGATGTGGGCAAGCTCATCCAGCAGGGACGACAGAGCAAGGGCCTCAGCCAAAAGGACCTGGCAACTAAAATCTGCGAAAAGCAGCAAGTGGTAACCGACTACGAGGCCGGTCGCGGTATTCCAAACAACTTGATTCTGGGTAAAATGGAACGCGTTCTCGGCATTAAGCTGCGCGGCAAGGAGCGCGGCCAACCAATAGCACCTCCCGGTAAAAAG

CDS AA Sequence2

MSDWDSVTVLRKKAPKSSTLKTESAVNQARRQGVAVDTQQKYGVGTNKQHVTTKNTAKLDRETEELRHDKIPLDVGKLIQQGRQSKGLSQKDLATKICEKQQVVTDYEAGRGIPNNLILGKMERVLGIKLRGKERGQPIAPPGKK

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.