Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
vvl (FBgn0086680) TF
 
(1.02/-0.56/2.53)

Factor activity

Additional information

vvl [FlyBase] | vvl [FlyMine] | vvl [BDGP]

H. sapiens orthologues1

POU3F2 (HGNC:9215, ENSG00000184486), POU3F3 (HGNC:9216, ENSG00000198914), POU3F4 (HGNC:9217, ENSG00000196767), POU3F1 (HGNC:9214, ENSG00000185668)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCCGCGACCTCGTACATGACGCCGCCGAGCGGTGATCTGGACATGGCCCTCGGAGGCGGTGGCTATCACACCTCGTCGCCGCGCTCGGCGGCTGATGCCGGTGAAATGAAGTACATGCAGCACCATCATCATCATCATGCCGCTGCCGCGGCAGCTGCCCACCATCAGTTGCCCTCGTCGCCATCGCCCAATGGCCAGGGCAATGGTGGCGGACTTGGATTGGGTTCCGGTTCCGGGTTGGGCTCATGGAGTGCCCTCCATCCGGATCCGTGGATGCAAACCCATCATACGCACCATCTGCCCGCCGCCGCTGCCGTTGCCTCGGCCGCTGATACCGTCAAGCAGGAGATGTCGCATCTCTCGCAGCAGACGCGCATCCAACAGGGCATGGCCTCGCCCCATGCCGCCTGGCATGCCCCCCATGCGGGACACTATGCGCCAACGGGCGGGTCACCGTTGCAGTACCATCATGCCATGAACGGAATGCTCCATCATCCGGCCCATGCGGTTGCAGCGGCCCATCATCAGAGTGTGGCGCCACTGCATCATACGCTGCGCGGGGAATCGCCACAGCTGCACATACACCATCACATGGGCGGCGGCGATCGGGATGCCATAAGCGGCGGCGAGGAGGACACTCCCACGTCCGATGATCTGGAGGCCTTTGCCAAGCAGTTCAAGCAGCGCCGAATCAAGCTGGGCTTTACCCAGGCCGATGTGGGCCTGGCACTGGGCACTCTCTATGGCAATGTGTTCTCCCAGACGACCATCTGCAGATTCGAGGCACTGCAGCTGAGCTTCAAGAACATGTGCAAGCTGAAGCCGCTGCTGCAGAAGTGGCTGGAGGAGGCGGACTCCACAACGGGTTCACCCACGTCCATTGACAAGATCGCCGCTCAGGGGCGTAAGCGCAAGAAACGCACCAGCATCGAGGTGAGCGTGAAGGGGGCACTGGAGCAGCACTTCCACAAGCAGCCGAAGCCATCCGCCCAGGAGATAACCTCGTTGGCCGACTCCTTGCAGCTGGAGAAGGAGGTGGTACGCGTGTGGTTCTGCAATCGGCGGCAGAAGGAGAAGCGCATGACGCCGCCAAATACGCTCGGCGGCGACATGATGGACGGCATGCCGCCGGGCCATATGCATCATGGTGGCTATCATCCGCATCACGATATGCACGGCAGTCCGATGGGCACACACTCCCACTCGCACAGTCCGCCCATGCTGAGCCCACAGAATATGCAATCCTCGGCGGTAGCGGCGCATCAGTTGGCGGCCCAC

CDS AA Sequence2

MAATSYMTPPSGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSPSPNGQGNGGGLGLGSGSGLGSWSALHPDPWMQTHHTHHLPAAAAVASAADTVKQEMSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQYHHAMNGMLHHPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSPMGTHSHSHSPPMLSPQNMQSSAVAAHQLAAH

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.