Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
run (FBgn0003300) TF
 
(-1.36/-4.46/-0.38)

Factor activity

Additional information

run [FlyBase] | run [FlyMine] | run [BDGP]

H. sapiens orthologues1

RUNX1 (HGNC:10471, ENSG00000159216), RUNX2 (HGNC:10472, ENSG00000124813)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCATCTGCCAGCGGGTCCAACGATGGTGGCCAACAACACACAGGTCCTGGCCGCTGCCGCCGCCGCAGCAGCCGCCGCAGCGGCCGCGGTAGCCCAGGGTCCTGGGCCGCAGCAGAGTAGCAATGCCACCACCGCCTCCGCAATCGCCATCAATCCCGCCCAGAGTCTGGCCAACACGAGCACCCACTCGGCCAGCAGCACGGGCAGCTCCACACCAGATCTCAGCACGAACAACACCAGCTCGAGCAGCAACGCCACCACCAGTCCGCAGAACTCCGCCAAGATGCCCAGCTCGATGACCGACATGTTCGCCAGCCTGCACGAGATGCTGCAGGAGTATCACGGCGAGCTGGCCCAGACCGGATCGCCCTCGATCCTCTGCAGCGCCCTGCCCAATCACTGGCGGTCGAACAAGTCGCTGCCCGGAGCCTTCAAGGTGATCGCCCTGGACGACGTGCCCGATGGCACCCTGGTGTCCATCAAGTGCGGCAACGACGAAAACTACTGCGGCGAGCTGAGGAACTGCACCACGACCATGAAGAACCAGGTGGCCAAGTTCAACGATCTGCGCTTCGTGGGACGATCGGGACGCGGCAAGTCCTTCACGCTGACCATCACCATTGCCACCTATCCGGTGCAGATCGCCAGCTACAGCAAAGCCATCAAGGTGACCGTCGACGGGCCACGGGAGCCAAGAAGTAAGCAAAGCTATGGCTATCCCCATCCCGGCGCGTTTAACCCGTTCATGCTGAATCCCGCTTGGCTGGATGCGGCGTACATGACCTACGGCTATGCGGACTACTTCCGCCACCAGGCAGCCGCCCAGGCGGCCCAGGTGCATCATCCGGCACTGGCCAAGTCCTCGGCTTCCTCGGTGTCGCCAAATCCCAATCCATCGGTGGCCACCAGCTCCTCGTCGGCGGTTCAGCCATCTGAGTATCCCCATCCGGCGGCAGCAGTGGCAGCGGCGGCGGGACAACCGGCGGCCATGATGCCATCGCCACCGGGAGCGGCGCCTGCCACGCCCTATGCCATTCCGCAGTTCCCATTCAACCATGTGGCCGCCGCAGCCGCCGCCAAGGCAGCCACGCCACACGCCTTCCATCCGTATAACTTTGCCGCGGCAGCTGGCTTGCGGGCCCGCAATGCTGCCCTGCACCACCAGAGCGAGCCGGTCCACGTCAGCCCCGCCTCCTCCAGGCCCTCCAGCTCCTCGCCCACCCAGCAACACGTCCTGCTGAAGCTAAACACCTCCATCGAGACGAGCTCCATCCACGAGCAGTCCGCCAGTGACGGCGACTCCGACGACGAGCAGATCGACGTGGTCAAATCGGAGTTCGACCTGGACAAGAGCCTGGATGTGGCGCCACTTCGCATGCGCTGCGACCTGAAGGCGCCCTCGGCCATGAAGCCGCTCTACCACGAGAGCGGTCCTGGAGCGGTAGCCAACAGCCGCCAGCCGTCGCCGGAAACGACCACCAAGATCAAGAGCGCCGCCGTGCAGCAGAAGACCGTGTGGCGGCCCTAC

CDS AA Sequence2

MHLPAGPTMVANNTQVLAAAAAAAAAAAAAVAQGPGPQQSSNATTASAIAINPAQSLANTSTHSASSTGSSTPDLSTNNTSSSSNATTSPQNSAKMPSSMTDMFASLHEMLQEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCGELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDGPREPRSKQSYGYPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAAAQAAQVHHPALAKSSASSVSPNPNPSVATSSSSAVQPSEYPHPAAAVAAAAGQPAAMMPSPPGAAPATPYAIPQFPFNHVAAAAAAKAATPHAFHPYNFAAAAGLRARNAALHHQSEPVHVSPASSRPSSSSPTQQHVLLKLNTSIETSSIHEQSASDGDSDDEQIDVVKSEFDLDKSLDVAPLRMRCDLKAPSAMKPLYHESGPGAVANSRQPSPETTTKIKSAAVQQKTVWRPY

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.