Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Hr78 (FBgn0015239) TF
 
(-0.87/-2.52/0.24)

Factor activity

Additional information

Hr78 [FlyBase] | Hr78 [FlyMine] | Hr78 [BDGP]

H. sapiens orthologues1

NR2C2 (HGNC:7972, ENSG00000177463), NR2C1 (HGNC:7971, ENSG00000120798)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGACGGCGTTAAGGTTGAGACGTTCATCAAAAGCGAAGAAAACCGAGCGATGCCCTTGATCGGAGGAGGCAGTGCCTCAGGCGGCACTCCTCTGCCAGGAGGCGGCGTGGGAATGGGAGCCGGAGCATCCGCAACGTTGAGCGTGGAGCTGTGTTTGGTGTGCGGGGACCGCGCCTCCGGGCGGCACTACGGAGCCATAAGCTGCGAAGGCTGCAAGGGATTCTTCAAGCGCTCGATCCGGAAGCAGCTGGGCTACCAGTGTCGCGGGGCTATGAACTGCGAGGTCACCAAGCACCACAGGAATCGGTGCCAGTTCTGTCGACTACAGAAGTGCCTGGCCAGCGGCATGCGAACTGTGCAGCACGAGAGGAAACCGATTGTGGACAGGAAGGAGGGGATCATCGCTGCTGCCGGTAGCTCATCCACTTCTGGCGGCGGTAATGGCTCGTCCACCTACCTATCCGGCAAGTCCGGCTATCAGCAGGGGCGTGGCAAGGGGCACAGTGTAAAGGCCGAATCCGCGGCCACGCCTCCAGTGCACAGCGCGCCAGCAACGGCCTTCAATTTGAATGAGAATATATTCCCGATGGGTTTGAATTTCGCAGAACTAACGCAGACATTGATGTTCGCTACCCAACAGCAGCAGCAACAACAGCAACAGCATCAACAGAGTGGTAGCTATTCGCCAGATATTCCGAAGGCAGATCCCGAGGATGACGAGGACGACTCAATGGACAACAGCAGCACGCTGTGCTTGCAGTTGCTCGCCAACAGCGCCAGCAACAACAACTCGCAGCACCTGAACTTTAATGCTGGGGAAGTACCCACCGCTCTGCCTACCACCTCGACAATGGGGCTTATTCAGAGTTCGCTGGACATGCGGGTCATCCACAAGGGACTGCAGATCCTGCAGCCCATCCAAAACCAACTGGAGCGAAATGGTAATCTGAGTGTGAAGCCCGAGTGCGATTCAGAGGCGGAGGACAGTGGCACCGAGGATGCCGTAGACGCGGAGCTGGAGCACATGGAACTAGACTTTGAGTGCGGTGGGAACCGAAGCGGTGGAAGCGATTTTGCTATCAATGAGGCGGTCTTTGAACAGGATCTTCTCACCGATGTGCAGTGTGCCTTTCATGTGCAACCGCCGACTTTGGTCCACTCGTATTTAAATATTCATTATGTGTGTGAGACGGGCTCGCGAATCATTTTTCTCACCATCCATACCCTTCGAAAGGTTCCAGTTTTCGAACAATTGGAAGCCCATACACAGGTGAAACTCCTGAGAGGAGTGTGGCCAGCATTAATGGCTATAGCTTTGGCGCAGTGTCAGGGTCAGCTTTCGGTGCCCACCATTATCGGGCAGTTTATTCAAAGCACTCGCCAGCTAGCGGATATCGATAAGATCGAACCGTTGAAGATCTCGAAGATGGCAAATCTCACCAGGACCCTGCACGACTTTGTCCAGGAGCTCCAGTCACTGGATGTTACTGATATGGAGTTTGGCTTGCTGCGTCTGATCTTGCTCTTCAATCCAACGCTCTTGCAGCAGCGCAAGGAGCGGTCGTTGCGAGGCTACGTCCGCAGAGTCCAACTCTACGCTCTGTCAAGTTTGAGAAGGCAGGGTGGCATCGGCGGCGGCGAGGAGCGCTTTAATGTTCTGGTGGCTCGCCTTCTTCCGCTCAGCAGCCTGGACGCAGAGGCCATGGAGGAGCTGTTCTTCGCCAACTTGGTGGGGCAGATGCAGATGGATGCTCTTATTCCGTTCATACTGATGACCAGCAACACCAGTGGACTG

CDS AA Sequence2

MDGVKVETFIKSEENRAMPLIGGGSASGGTPLPGGGVGMGAGASATLSVELCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRTVQHERKPIVDRKEGIIAAAGSSSTSGGGNGSSTYLSGKSGYQQGRGKGHSVKAESAATPPVHSAPATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQQQQHQQSGSYSPDIPKADPEDDEDDSMDNSSTLCLQLLANSASNNNSQHLNFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGNLSVKPECDSEAEDSGTEDAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAFHVQPPTLVHSYLNIHYVCETGSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAIALAQCQGQLSVPTIIGQFIQSTRQLADIDKIEPLKISKMANLTRTLHDFVQELQSLDVTDMEFGLLRLILLFNPTLLQQRKERSLRGYVRRVQLYALSSLRRQGGIGGGEERFNVLVARLLPLSSLDAEAMEELFFANLVGQMQMDALIPFILMTSNTSGL

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.