Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Pcl (FBgn0003044) cofactor
 
(-1.07/-4.05/-0.31)

Factor activity

Additional information

Pcl [FlyBase] | Pcl [FlyMine] | Pcl [BDGP]

H. sapiens orthologues1

MTF2 (HGNC:29535, ENSG00000143033), PHF19 (HGNC:24566, ENSG00000119403), PHF1 (HGNC:8919, ENSG00000112511)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGATGAACAACCATTTTCACTTGCAACACGATCATCCACCGCAGAACGTGGCACATCCGTTCATGCAACAGCCGAGTACCGCTGTCCCATCAGCTCCTCCGGCCACCTACGGCTACTTAGCACAGCCAGCTGGCCAGCAGCCGCAGTGGATGACGACCACCTACCAGATCCTGCCGCCCAGCGTAGGACCTGCCACGGTGGCCAAGCGATACTATGCCACCACTGGGCCGCAGACCACGCATCCCACACATCCCAGCACCATCCAGATCACGAACAGTTTCGCTCAGCAATCAACGCCACCGAAGCAACAGGCGGCAACAAGCTGCAGCCCATTCAAGGCCAACAACATACGAATCATCTCGACGGCGCCAAGTGTATACAGTCTGAATAAGCCGCCACAGGAAGCGCACTCCACATATGCTCCCGTTCAGTCGTACTACTTGCCCAGTGGCGGTGGCCAAACTGCGGGACAAATCAATCTACTGGCGGCCAGCGGAACTGGCAAGCAACTGCAGCCGCCGCCGCTGGTGCCTGTGACCAATTCCACCTCACCGCCCTCCACCGTCGTGTTAGACCGCATAAACATTTGCATCAATAACCACTATACGGAGACGCCCACTTCGCTAAGTTCATCGCTTACCACGGCCCAACAACCTTCGCCCATCATACCGGCCATCCAGCACAAGGCCATCCTGCCCCTCATCGACAGCAGCACGGCGGATAGCAGCAGCTGCAGCAGCAGTTCTGTATCCAGCAGCAGTTATAGTGGTACCGCGACCACCTCAGCAGCAGTTGTGATTGTGGATGAGCCGGATTCTACGACCACAACGCCACAGACACCGCCAACTACGCCGGAGGCCATGAGTTCACCCGGTAAAAGTTCGCCCTCGCCTCCGCTACTAGCCACGCAATCGCTGCTCAAAGGCGTCAACTCAATGAAGCCAAGCTTCAAGACCGTCGAAGCAGCACCGCCAACGCCGCCAACACCTCCATCACCACCACCACCGCCGCCGGCACCACCAGTTGCCGCTCCCTCGCCAGCGGTCACGTATGCGCTTCAGGAGGACGTCTTCATCAAATGCAACGATGGCAGATTTTACCTGGGCACCATTATTGACCAGACAAGCGATCAATATCTTATCCGCTTTGATGACCAGTCGGAGCAATGGTGTGAACCGGATAAGCTGCGCAAGCTAGGTGGCGGTAGCTCGATTACCGCTGGCGGAGGCGGTGCCTCTACCACGGAATCCACGAATACCTCCCCCAGTGGACCCATGTGCGTGGCCTGCAAGCGATCGGATATCGAAGATGTGGTCGAAATTTGCGAGCGCTGCGGACGTGGCTACCATCGTGGTTGCACCGTTGAAATTGTTACTGGCAGTGGAATTTGGAGTTGCAAACGCTGCGCTAAACCCATGAAAATGCAACAGCCTGTCAGCCATAAGATCACAAAACCAGCGGGAATTTGTCGCCAGTTGCCCTACCATGCGGATAAGCTCAGCTGGGATGAGAAGCATCGGGTCAACGAAGAGCAGATCTACTGCTACTGCGGCAAACCGGGAAAATTCGATCACAATATGCTGCAGTGCTGCAAATGTCGGAACTGGTTCCACACCCAATGCATGCAGAACTTCAAGAAGAAGCTGCTGCGCGGCGATATGTTCTTTGTTTTCTGCTGCACGGTCTGCAACAATGGCATAGAATTCGTTCGTCGTATGCAAATCGAATGGGTGGATGTGCTCCACATTGCACTATACAATCTGCGAAAGCATCAGCACCAGAAGTACCATCACCTGCTAAATGACATTTGGCCCTTCATACTCGAGCAGCGCCACCAGCTGCCTATCTGCGAGAAGTGGCGCACACTGCCCGAAACGGCACTGATGGAGCGTCTCAAGCAAACCCTTAAGGATTACTCTGACAGATTTGTTTGCGGCAGGGAGTTTAAAAGGGCTCCGGCCTTCTATGCACTGAGACACAGTGGCCCGCCACACATTCCCAAGGTATTCCTTGAGCCCCACGAGGAGCTGTCCGATGAGCTGCTCGAAAAAAGATTTAAACTAATGCTCATGCCCGAGGAGCCTGATGAAGGTGCCAACGAGCTTCCGAAAAGAGTTCCCAAAGATGTGTATGAGTTTAATACAGATGAAGATGACCCAGTCGAGACCAGCGAGGACGAAATACCCATCAAACAGATTATTGAGAAGGCCAAAAAGCAGGCCGCTCAGAAGGCCGATAAGCATGATGAGTTGCCACTGAAGCCGGACCTCGCCGACGACAATGCCAACGATGGCGATCCCGGCAAACTACCAGCTCCCATTCCACCTCTGCTGGACGCAAACAGCAGTCGGAAGCGCAAGGCTTTCCGATTGTCCAAACGCTATGACAACAGCCGCAATCACTGTGATCTATCATCCGACGAGAATTCAAGCAGCAGTCGGGGAACCAGTTCGTTGGACCTCATCATACCACCGCCGGTCAACTTTTTGGGACGCAACAATCCATTCCTTATGGCCACTCCCAAAAAGGCGTCGCAGGGACGAAGTATTTCTGTGGGAACTGGAGTCGGAGTAAATGGCATCATAAACAGCATTTTCAAGCTTAAGGGCACCTCCAAGGAGCAGCCGCGCATGGTGCGCACCATCAAGCGAAGACTGAGTGCCAAAGACATTACGATAGGGCCCAATCAGGAAGTGCGCAGACGACGCACTCGCCGCCTGACCACGGCCATTGAGGTCATCAGCACCACCACCATCAATCCCATACCCAGCCACTACCTTCCTATCTATGCCAAAGATCTGCAGCCACCCGCGCCGCCAATGGGAAAGCCGACACATGGGCGCCTGTTGCGCCAGCGACCACAGAAGCAGTCACCCAGCCAAAGCCGCCGGAACTCCACCAGCTCGACGGCAACCAGCAGCAGCAGCAACGGCATTGGAGCCCCAGGACATTCCATGCTGGACTTGAAGCAGTCGGTGAACAAGTACTTTGGTGGCGCTATGAATCGCATAGATGCTGGTGAGCCCTTTGCCATTCGGGCCAAGCGGCGCATGGGAAATGGACAGGTCCAGTACCTGGTGGAGTGGGGCGGAGATACAGCGACAACGGCGATTGGATTGCTTGGAAAT

CDS AA Sequence2

MMNNHFHLQHDHPPQNVAHPFMQQPSTAVPSAPPATYGYLAQPAGQQPQWMTTTYQILPPSVGPATVAKRYYATTGPQTTHPTHPSTIQITNSFAQQSTPPKQQAATSCSPFKANNIRIISTAPSVYSLNKPPQEAHSTYAPVQSYYLPSGGGQTAGQINLLAASGTGKQLQPPPLVPVTNSTSPPSTVVLDRINICINNHYTETPTSLSSSLTTAQQPSPIIPAIQHKAILPLIDSSTADSSSCSSSSVSSSSYSGTATTSAAVVIVDEPDSTTTTPQTPPTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPPTPPSPPPPPPAPPVAAPSPAVTYALQEDVFIKCNDGRFYLGTIIDQTSDQYLIRFDDQSEQWCEPDKLRKLGGGSSITAGGGGASTTESTNTSPSGPMCVACKRSDIEDVVEICERCGRGYHRGCTVEIVTGSGIWSCKRCAKPMKMQQPVSHKITKPAGICRQLPYHADKLSWDEKHRVNEEQIYCYCGKPGKFDHNMLQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCNNGIEFVRRMQIEWVDVLHIALYNLRKHQHQKYHHLLNDIWPFILEQRHQLPICEKWRTLPETALMERLKQTLKDYSDRFVCGREFKRAPAFYALRHSGPPHIPKVFLEPHEELSDELLEKRFKLMLMPEEPDEGANELPKRVPKDVYEFNTDEDDPVETSEDEIPIKQIIEKAKKQAAQKADKHDELPLKPDLADDNANDGDPGKLPAPIPPLLDANSSRKRKAFRLSKRYDNSRNHCDLSSDENSSSSRGTSSLDLIIPPPVNFLGRNNPFLMATPKKASQGRSISVGTGVGVNGIINSIFKLKGTSKEQPRMVRTIKRRLSAKDITIGPNQEVRRRRTRRLTTAIEVISTTTINPIPSHYLPIYAKDLQPPAPPMGKPTHGRLLRQRPQKQSPSQSRRNSTSSTATSSSSNGIGAPGHSMLDLKQSVNKYFGGAMNRIDAGEPFAIRAKRRMGNGQVQYLVEWGGDTATTAIGLLGN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.