Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Orc4 (FBgn0023181) cofactor
 
(-0.42/-2.87/0.27)

Factor activity

Additional information

Orc4 [FlyBase] | Orc4 [FlyMine] | Orc4 [BDGP]

H. sapiens orthologues1

ORC4 (HGNC:8490, ENSG00000115947)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCCGGAGGCGGATAGGGAGCTGGTCAGCATCAGGCGCTTCCTGAAGGAGCGCCTCCAGCGAGACTACACCACCTTGAGGGGCTACGCAAAGGAGCGGTCCAATGTGCGCCTATTGCTGCAACGCACAGCTGAAATGGGGGAATCCAACTCCTTGCTGCTCCTTGGGCCGCGGGGATCCGGAAAGACAACGCTCATCAACTCCGTGCTGGCCGATTTGCTGCCCAATAAATCGTTCGGGGAAAACACTCTCATCGTCCACCTGGACGGTAATCTGCACACGGACGACCGAGTGGCCCTGAAGTCCATCACTGTGCAGATGCAGCTGGAGAACGCTGCGGATGGGAAAGTGTTCGGATCGTTCGCCGAGAACCTCGCCTTCCTGCTGCAATGCCTCAAGGCGGGTGGCAAGCATTCCAAGAGCGTGATCTTTATTCTCGAGGAGTTCGACCTCCTCTGTGCTCACCACAACCAGACCCTGCTCTACAACCTCTTCGACGTCTCCCAGTCAGCCCAGGCGCCCATCTGTGTACTTGGCGTTACCTGTCGCCTCGACGTGATCGAGCTGCTGGAGAAGCGGGTCAAGTCGCGTTTCTCGCACCGGCAGGTCTTTCTCTTTCCCAGCTTGCGGCGCTTTGAGGATTACGTTGACCTGTGCAGGGATCTACTGTCCCTCCCGACCGGCAATTCACTGTTGCTGGCGGCGGAGAAAATCTATAACCTACAAAACATCCAGTCGGGGGCACTTTACTTCTCCCGCAACCATTTTGACCCCGGGGAGTACGGCTTTTCGCCCAGACTACGCGATGCCTGGAACAAGCAAATATGCAAAGTCCTGGCCACTCAGCAGGCAAGAAGCACCCTCCAAGCGCTCCATGACTTCGACATTAGCGAGGCCTATCTCAAGAACTTCCTATTCCGCCTGGTGGCACATCTCCGACCGCAATCTCCCCACATCACAGCCGAAAAAATGGCTGCAGTGGGATCACAGTTTGAGGGCGACGACAAGATAGAGCTGCTTTGCGGGCTCTCAGTCCTAGAGCTGTGCCTGATCATCGCCATCAAGCACCATTCGCAGATTTACGATCGCGATTCCTTCAACTTCGAGATCATTTACGCGCGCTTTTCCAAGTTTGCCAAAGTGTCCACCACAATGCAGGCCGTGGAGCGGTCCATTGTCCTGAAGGCCTTCGAGCATTTACGCATCGCAGAGCTGATCATGCCGCTCACCGGTGGAGCTGGAGGGGGCGTAGGTAAGGTGCAGAAAGAGTTTGAGATGCATAAGCTGGCGCTGACATACAGCCAGATTCACCACTGTATGCAGCGATACCAGGCCCTTCCCACAGAGGTTGCTCAGTGGGCGCAAAGCTCTCTGATT

CDS AA Sequence2

MPEADRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFDLLCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTGGAGGGVGKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSSLI

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.