Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
dom (FBgn0020306) cofactor
 
(-0.39/-1.70/0.54)

Factor activity

Additional information

dom [FlyBase] | dom [FlyMine] | dom [BDGP]

H. sapiens orthologues1

EP400 (HGNC:11958, ENSG00000183495)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAATGAAGGTAATTCAGCAGGAGGGGGGCATGAAGGGCTCAGCCCGGCCCCTCCTGCTGTGCCAGACCGCGTAACTCCACATTCAACGGAAATTTCAGTTGCCCCCGCCAATTCTACAAGCACAACAGTACGAGCAGCAGGATCAGTAGGAGCAGCCTTGCCGGCCACCCGCCATCACCAACATATAGCGACCCAAGTGAAGGGAATCGCCAGCAGCAGCAGCAAACAACAGAAGCAACTGGCCAGTGCGCAGCTGCCTGTGCCGCTGTCGCCCTTGCCGCAACAACAACAGCAAACGGCAGAGGCAACGGCAGCAGCAGCAGCACCCGCCCACTCCAACGTATCCGTTTCCTCCAGCACAATAGAAGCCTCTGTTTTGCCGCCGCAGGCCAAGCGTCAGCGTTTGGACGACAACGAGGACAGGACGAGTGCCGCCAGCATTGTTGGACCAGCCGAGAGCAGCAACATTGTAAGCTCCCTGCTACCAGCGTCGGTGGCCTCCAGCAGCGAGGTCGGCGGGCTTTCTTCTACGGCCCTGCAGGACTTGAATGCCCTCAAGAAGCGCATACTCCAGCAGAAATTGCAGATCTTGCGTAATCTTAAAGAAAGGCATCTTGAAAATGTGTCCGAATACTTTTACCTACAAAACGGCGGCAGTATGATGGACTACCCCGCGTGGCGCAAGAAGACACCAACCCCGCAGTTCATCAGCTACAGCAATGCGAATCGTATAGATCAGCTGATACACGAAGATAAGCCAAGCACATCAGCAGCAGCAGCTGCGGCACAGAATCAGAAATATACCACCCAACAGACAGACTCTGTGGAGTCCTCACTAGTCAGTGGCATCGGTACTGGAGCGACAAAAGGAGCGCCATTGGATGGCAATATCAGCAATAGTACTGTGAAAACGAATACGCAATCTCAAGTTCCAAGCAAGATTGGCAGCTTCACAGAATCAACGCCCGCAGCAACAGAAAGCAACTCAAGTACCACAGTTCCAGGAACAGCTACAAGTGGCGCCGCAACCAGCACATCAGCTACTTCGGCCGAGGCTAGTGGTAATGTCCTGGCAGTGGAAGCAGAAATCAAAATCCCAGCTGTTGGAGCCACACCAGTGGCCATTTCCACCAAGCTTCCCGCTGCCGTCGTCCAGCTAACGCAACAAGGTCACATACCCGGTAGACCTTTAGGAGGTCGTCACGGTATGGTCTTCGGTCAAATACCCGCTCCTCCTGCTGCCGTAGGAAATCCTTCTGTACCTTTGGTGCCAGGTGCTTATCGTTCGCAAACAACAAACAAAAAAATATCAAAAATCTTTCACAGC

CDS AA Sequence2

MNEGNSAGGGHEGLSPAPPAVPDRVTPHSTEISVAPANSTSTTVRAAGSVGAALPATRHHQHIATQVKGIASSSSKQQKQLASAQLPVPLSPLPQQQQQTAEATAAAAAPAHSNVSVSSSTIEASVLPPQAKRQRLDDNEDRTSAASIVGPAESSNIVSSLLPASVASSSEVGGLSSTALQDLNALKKRILQQKLQILRNLKERHLENVSEYFYLQNGGSMMDYPAWRKKTPTPQFISYSNANRIDQLIHEDKPSTSAAAAAAQNQKYTTQQTDSVESSLVSGIGTGATKGAPLDGNISNSTVKTNTQSQVPSKIGSFTESTPAATESNSSTTVPGTATSGAATSTSATSAEASGNVLAVEAEIKIPAVGATPVAISTKLPAAVVQLTQQGHIPGRPLGGRHGMVFGQIPAPPAAVGNPSVPLVPGAYRSQTTNKKISKIFHS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.