Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG11085 (FBgn0030408) TF
 
(-0.86/-3.78/0.07)

Factor activity

H. sapiens orthologues1

NKX1-2 (HGNC:31652, ENSG00000229544)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCAGAGCTCAAAATCTTTTTTAATACGCGATCTTCTGGGCGATTTGATTAATCGACGACAAACAGATTCGGAACTGGAGCTCTCCAACGACGATTCGGATATAGACATTGAGGATCGATCTACGCCGGACTCGACGGCTGCGGGCTGCCAGCAGGAGCTACTGCTGTCGCACCATCACCGCAGATTCACCCACCACGACGAATCCAGTGTGGAGTCCTGCCTATCGGCCACAAGGGGCCCCGGCTCTGGCACAGGATCGGGTGGTGGCGGAGGTGGTGGTGGTGGAGGAGGAGTAGCCAGCGGACTGAGCGCCGCTGCAGCGGCGGCGGGCGTGGCTGCTGGACTCCTGGCAGCGGCGGCCAGTGGTGCCAATGGGGATCGGGATGCCAACGGTGGCAGTGGCCCGGGATCCGGTGGCGGTACAAGTGGCGGCTATGCGGAGCACAAGCTGCAGCTGAGCAAAAGTGGCCGGAAGCCGCGACGCCGCCGAACCGCCTTCACCCACGCCCAGCTCGCCTACTTGGAGCGGAAGTTCCGGTGCCAGAAGTACCTGAGCGTGGCCGATCGCAGCGATGTGGCCGAAACGCTCAATCTGTCCGAGACGCAGGTGAAAACCTGGTACCAGAATCGCCGGACCAAATGGAAGCGACAGAATCAACTGCGTCTGGAGCAGCTGCGTCATCAGGCGACCATGGAGAAGGATTTTGTGGTCCAGGATGGCGGCGGTGCGGGCGGACTCGGCTGCTGTCCCAGCGGACTGAGCAGTTCTTTTAGTGCCGCCGCCGCTGCTGCAGCGGCTGCCAGCAATCCTTGCAATTTTCTCACTTCCGCCGCAGCGGCGGCCATTTTCCGTAATGTCGGCTATGTCCACGGATGTCCCATG

CDS AA Sequence2

MQSSKSFLIRDLLGDLINRRQTDSELELSNDDSDIDIEDRSTPDSTAAGCQQELLLSHHHRRFTHHDESSVESCLSATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPSGLSSSFSAAAAAAAAASNPCNFLTSAAAAAIFRNVGYVHGCPM

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.