Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Nurf-38 (FBgn0016687) cofactor
 
(-0.42/-1.52/0.06)

Factor activity

H. sapiens orthologues1

PPA2 (HGNC:28883, ENSG00000138777), PPA1 (HGNC:9226, ENSG00000180817)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCTCTGTACGAAACCGTTGAGAAGGGCGCTAAGAATTCGCCGAGCTACAGCCTGTATTTCAAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACGCCAACGAGGAGAAAACTATCTACAACATGGTGGTGGAGGTGCCACGTTGGACCAACGCGAAAATGGAGATTAGCTTGAAGACCCCTATGAATCCCATCAAGCAGGACATCAAGAAGGGTAAGCTGCGGTTCGTGGCCAACTGCTTCCCGCACAAGGGCTACATCTGGAACTACGGAGCCCTGCCCCAGACCTGGGAAAACCCCGACCACATCGAGCCCTCCACCGGCTGCAAGGGTGACAACGATCCCATCGATGTCATCGAGATTGGCTACCGAGTGGCTAAGCGCGGCGACGTGCTGAAGGTCAAGGTGCTGGGCACCATTGCCTTGATTGACGAGGGCGAAACCGACTGGAAGATAATCGCCATCGATGTGAACGATCCGTTGGCCTCGAAAGTCAATGATATCGCCGATGTGGACCAGTACTTCCCGGGTCTGCTTCGTGCCACCGTTGAGTGGTTCAAGATCTACAAGATCCCCGATGGCAAGCCTGAGAATCAGTTTGCTTTCAACGGCGATGCCAAGAATGCGGACTTTGCCAACACCATCATTGCCGAGACCCACAAGTTCTGGCAGAACTTGGTGCACCAGAGCCCCGCATCCGGGTCCATCTCCACCACCAACATCACCAACCGCAACTCGGAGCACGTCATTCCCAAGGAGGAGGCCGAGAAGATACTGGCCGAGGCCCCCGATGGCGGCCAGGTCGAGGAGGTGTCTGATACAGTCGACACTTGGCATTTCATTCATCTCAAG

CDS AA Sequence2

MALYETVEKGAKNSPSYSLYFKNKCGNVISPMHDIPLYANEEKTIYNMVVEVPRWTNAKMEISLKTPMNPIKQDIKKGKLRFVANCFPHKGYIWNYGALPQTWENPDHIEPSTGCKGDNDPIDVIEIGYRVAKRGDVLKVKVLGTIALIDEGETDWKIIAIDVNDPLASKVNDIADVDQYFPGLLRATVEWFKIYKIPDGKPENQFAFNGDAKNADFANTIIAETHKFWQNLVHQSPASGSISTTNITNRNSEHVIPKEEAEKILAEAPDGGQVEEVSDTVDTWHFIHLK

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.