Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Tfb1 (FBgn0033929) cofactor
 
(-1.03/-4.16/-0.15)

Factor activity

Additional information

Tfb1 [FlyBase] | Tfb1 [FlyMine] | Tfb1 [BDGP]

H. sapiens orthologues1

GTF2H1 (HGNC:4655, ENSG00000110768)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGACCACCAGCAGTGAGGACGTGCTGCTCCAGATGGGCGAGGTGCGGTACAAGAAGGGCGACGGCACGCTCTACGTAATGAATGAGCGTGTGGCCTGGATGGCGGAACACCGGGACACGGTAACAGTCTCCCATCGTTATGCGGATATCAAGACTCAAAAGATATCTCCTGAGGGCAAGCCCAAGGTGCAGCTGCAAGTGGTTCTTCACGACGGCAACACATCGACCTTCCACTTCGTCAACCGCCAGGGACAGGCCGCAATGCTTGCCGACAGGGACAAGGTCAAGGAGCTATTGCAGCAACTGCTTCCCAACTTCAAGCGGAAGGTGGACAAAGACCTGGAAGACAAGAACCGCATCCTTGTTGAGAATCCCAACCTGCTGCAACTCTACAAGGACCTTGTCATAACCAAAGTCCTAACCAGCGATGAGTTCTGGGCTACGCATGCCAAGGATCACGCCCTTAAGAAAATGGGCAGATCCCAGGAGATCGGTGTTTCTGGCGCCTTTCTGGCTGACATAAAGCCGCAGACAGACGGCTGTAATGGCCTCAAGTACAACCTCACCTCTGATGTGATTCACTGCATTTTCAAGACCTATCCCGCCGTTAAACGCAAACATTTTGAGAATGTGCCTGCCAAAATGTCCGAGGCCGAGTTTTGGACCAAGTTTTTCCAATCACACTACTTTCATCGTGACAGACTGACAGCCGGCACAAAGGACATATTCACGGAGTGCGGCAAGATCGATGACCAAGCATTAAAAGCGGCTGTTCAGCAGGGAGCTGGTGATCCTTTGCTAGACCTTAAAAAGTTTGAGGATGTTCCTTTGGAAGAGGGCTTTGGCAGCGTAGCAGGGGACCGCAACGTCGTGAACAGCGGGAATATTGTGCACCAAAACATGATCAAGCGATTCAATCAGCATTCCATCATGGTGCTTAAGACCTGTGCTAACGTGACCTCAGCGCCGTCAACTATGACCAATGGTACCAATAATGCCAACGGGCCTGTTTCCCAATCCGCGTATACGAACGGGATGAATGGAAAGGGCCAGGCCACGGCCACCGCGACGAAGAGTTCCTCCGATCAGGTGGACAAAGACGAGCCGCAGAGCAAAAAGCAACGACTGATGGAAAAGATTCACTATGTGGATCTCGGGGACCCTATATTGGAGGGAGATGATTCCGCCAACGGCGAGAAAGCCAAGTCTAAGCACTTCGAACTGTCCAAAGTGGAGCGTTACCTCAATGGCCCTGTCCAGAACAGCATGTACGACAACCACAACGATCCAATGAGTCTTGAAGAGGTGCAGTACAAGCTGGTGCGGAATTCGGAGTCATGGCTAAACCGCAACGTGCAACGAACGTTCATCTGTTCTAAGGCGGCAGTAAATGCTCTGGGTGAACTAAGTCCTGGCGGTTCCATGATGCGCGGTTTCCAAGAGCAGTCAGCGGGACAACTTGTTCCGAACGACTTCCAACGAGAGCTGCGCCACTTATACCTTTCGCTGTCCGAGCTGCTGAAACACTTTTGGAGCTGCTTTCCGCCCACCTCAGAAGAGCTGGAGACAAAGTTACAGCGTATGCACGAGACGTTGCAGCGCTTCAAAATGGCCAAACTAGTGCCTTTTGAGAACCGCGCTATGCACGAACTTTCGCCACTGCGATCCTCGCTGACGCAGCACTTGAATCAGCTGCTGCGCACCGCCAACAGCAAGTTCGCAACTTGGAAGGAGCGAAAACTGCGCAACACCAGG

CDS AA Sequence2

MTTSSEDVLLQMGEVRYKKGDGTLYVMNERVAWMAEHRDTVTVSHRYADIKTQKISPEGKPKVQLQVVLHDGNTSTFHFVNRQGQAAMLADRDKVKELLQQLLPNFKRKVDKDLEDKNRILVENPNLLQLYKDLVITKVLTSDEFWATHAKDHALKKMGRSQEIGVSGAFLADIKPQTDGCNGLKYNLTSDVIHCIFKTYPAVKRKHFENVPAKMSEAEFWTKFFQSHYFHRDRLTAGTKDIFTECGKIDDQALKAAVQQGAGDPLLDLKKFEDVPLEEGFGSVAGDRNVVNSGNIVHQNMIKRFNQHSIMVLKTCANVTSAPSTMTNGTNNANGPVSQSAYTNGMNGKGQATATATKSSSDQVDKDEPQSKKQRLMEKIHYVDLGDPILEGDDSANGEKAKSKHFELSKVERYLNGPVQNSMYDNHNDPMSLEEVQYKLVRNSESWLNRNVQRTFICSKAAVNALGELSPGGSMMRGFQEQSAGQLVPNDFQRELRHLYLSLSELLKHFWSCFPPTSEELETKLQRMHETLQRFKMAKLVPFENRAMHELSPLRSSLTQHLNQLLRTANSKFATWKERKLRNTR

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.