Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CtBP (FBgn0020496) cofactor
 
(-1.32/-4.36/-0.24)

Factor activity

Additional information

CtBP [FlyBase] | CtBP [FlyMine] | CtBP [BDGP]

H. sapiens orthologues1

CTBP2 (HGNC:2495, ENSG00000175029), CTBP1 (HGNC:2494, ENSG00000159692)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGACAAAAATCTGATGATGCCGAAGCGTTCGCGCATCGATGTCAAGGGCAACTTTGCCAACGGACCGCTGCAAGCACGCCCACTGGTGGCCCTACTCGATGGACGCGACTGCTCCATCGAGATGCCCATCCTAAAGGATGTGGCCACGGTGGCCTTTTGCGATGCACAAAGCACCTCCGAAATACACGAGAAGGTCCTCAACGAGGCAGTGGGAGCTCTGATGTGGCACACCATCATCTTGACAAAGGAGGATCTTGAGAAGTTCAAAGCTTTACGCATTATCGTGCGCATCGGCAGCGGCACAGACAACATTGATGTAAAGGCGGCGGGCGAACTGGGCATCGCCGTGTGCAACGTTCCCGGCTACGGAGTCGAGGAGGTGGCGGACACGACGATGTGCCTCATCCTCAACCTCTACCGGCGGACATACTGGCTAGCGAACATGGTGCGCGAGGGCAAGAAGTTCACCGGACCCGAGCAAGTGCGGGAGGCTGCGCATGGCTGTGCACGCATCCGCGGCGACACCTTGGGTCTGGTGGGACTGGGCCGCATTGGTAGCGCCGTGGCCCTGCGGGCTAAGGCGTTCGGCTTCAACGTCATCTTCTACGATCCCTACCTGCCCGATGGCATCGACAAGTCGCTGGGCCTAACTCGCGTCTACACGCTGCAGGACCTGCTTTTCCAGTCCGATTGCGTCTCACTGCATTGCACGCTCAACGAGCACAACCATCATTTAATCAATGAATTCACAATTAAACAGATGCGACCTGGTGCATTTCTGGTGAACACCGCACGCGGCGGTCTGGTCGATGACGAGACCCTGGCGTTGGCGCTGAAGCAGGGAAGGATAAGAGCTGCCGCCCTGGACGTTCACGAAAACGAACCTTACAATGTATTTCAAGGCGCACTGAAGGATGCCCCAAATCTGATTTGCACACCGCACGCCGCCTTCTTCAGCGACGCGTCCGCAACGGAGCTGCGCGAAATGGCAGCCACCGAGATCCGGCGGGCGATCGTCGGCAATATTCCAGACGTGCTGAGGAATTGCGTCAACAAGGAGTACTTCATGCGCACGCCGCCTGCCGCTGCCGCCGGGGGCGTGGCGGCGGCTGTTTATCCCGAAGGTAAACTACAAATGATATCAAATCAAGAAAAG

CDS AA Sequence2

MDKNLMMPKRSRIDVKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEPYNVFQGALKDAPNLICTPHAAFFSDASATELREMAATEIRRAIVGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEGKLQMISNQEK

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.