Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG32105 (FBgn0052105) TF
 
(2.83/0.35/5.11)

Factor activity

H. sapiens orthologues1

LMX1A (HGNC:6653, ENSG00000162761), LMX1B (HGNC:6654, ENSG00000136944)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCTGGAGTTCTACCCAATGCCCACGAATCTGAATCCAGTCGGTGGCAGTTTGTACTCGCTGCAGCAGAATCATGGCGGCGCGCGATTCCTGGACAATCCAAATCCCGGCAGCATGACTGCCAGCAGCGGCAACTCCCTGCATCTTAGCAATAGCAACAACAATCTGCCAACAAGCATTTCCGGCAACAATAGTCCCACGGCAACGGCTTCATTAACGGGGCAGCATCAGCAGCACCAGCAGCAGCAACATCAGCAGCAGCAGCAACACCCCCACCAGCAACATCAGCAACACCAGCAGCAACACGCTGCCTCGACCACGCCAGTGCCAATTAACAGCTGCCCCACGCCCACAGGACACAGCCCCCTCAGCAGCAGCAGCAGCAACAGCAACCACAACAATAACAACAACAACAACAACGGGGGCAGCAGCAGCAACAACCTCCACTCAGCCTGCAACACATTAACAGCTGCTGCTGTTGCCGCTGCCTCTGCCGCTGCTGTGGCAGCTCCATCGCCAGCAGGCACCTCAGTAGCCACCTCGCAATTAGGCGGAGCAGTTGCTGCGGCGATTGCTGCTGCTGCTGCGGCGGCTGCCGCTGCGACGACACCCACATCGACGGGCCCAGCGGCCACAGGAAGCGGAAATGCAAATGGCAGTGGCAACGGAAACGGAAATGGCAATGGCAATGGAAACGGGAATGGAAATGGGAATGGAGGTGGTGCAGCAACGGCATCGGCAGCAGCGGCATCCAAATTGTCTGCCGATTGCAGCGGACGCACAGAAGTGGGCCACATCAAGTGCGAGAAGAACTTCGAGCTGTGCGAGGGCTGTGGCCAGAAGATCCATGACCGATTCCTGATGAACGTGGGCGATGCCAACTGGCACGAGCAGTGCCTGGCCTGCTGCTACTGCGGAATGCAGCTGCACCACACCTGCTACGTGCGCAACTCGAAACTCTATTGCAAGATGGACTACGACCGGCTGTTCGGTGTGAAGTGCTCCTCCTGCTGCCATGCGATCCTGCCGCAGGAGCTGGTAATGCGACCCATACCGAACTTTGTCTTCCACCTGCCCTGCTTCGTTTGCTACGCCTGCCGATTGCCGCTCCAGAAGGGCGAGCAGTTCATGCTGCGCGATGGCCAGCTCTTCTGCTATCGTCACGATCTGGAGAAGGAGATGTTTCTGGCAGCCGCTGCTGCTCAGCACTGTGGGTTCGTTGGCCTGGACGAGGAGGATTTGCTGAGGCCACGGGATGGAAGGAGAGGTCCGAAACGACCACGCACCATCCTCACATCGCAGCAGCGCAAACAGTTTAAGGCCTCCTTCGATCAGTCACCCAAACCATGTCGCAAAGTGCGCGAAGCCCTGGCCAAGGACACCGGCCTATCGGTTCGTGTAGTGCAGGTGTGGTTCCAAAATCAGCGCGCCAAGATGAAGAAGATTCAGCGCAAGGCCAAGCAGAATGGTGGCTCCGGCGGAGGATCGGGCAGTGGGCGTGGCACGGGCAATTCCAGCGCCACCGACGATAAGGACACCAATGACAAGGAGGACAAGTGCGTCAAGCAGGAGCTCGGAGGAGATAGCTCCGGTTATTTGGGTGGATTGGACAGCACTTTCGCCAGCCAGCCGCTGAATCCCAATTTGCCCTTCTCACCGGATGACTATCCGGCCAACTCGAATGACAGCTTCTGCAGCTCGGACCTCTCGCTGGATGGGAGCAACTTTGACCAGTTGGATGACGATGCGGACTCGCTGTCGCTGAACAACCTGGAGCTGCAGTCCACCAGCTCGTCGGGCAACCAGCACTCGCACTCCCACTCGAATCCCCACGACATGCTGGCCAACCTGAACAACAGCCTGATAAACCCCATCGACAAGCTGTATCTCATGCAGAACTCGTACTTCAGCTCGGAGCAT

CDS AA Sequence2

MLEFYPMPTNLNPVGGSLYSLQQNHGGARFLDNPNPGSMTASSGNSLHLSNSNNNLPTSISGNNSPTATASLTGQHQQHQQQQHQQQQQHPHQQHQQHQQQHAASTTPVPINSCPTPTGHSPLSSSSSNSNHNNNNNNNNGGSSSNNLHSACNTLTAAAVAAASAAAVAAPSPAGTSVATSQLGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGSGNGNGNGNGNGNGNGNGNGGGAATASAAAASKLSADCSGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTNDKEDKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDYPANSNDSFCSSDLSLDGSNFDQLDDDADSLSLNNLELQSTSSSGNQHSHSHSNPHDMLANLNNSLINPIDKLYLMQNSYFSSEH

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.