Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Fer1 (FBgn0037475) TF
 
(3.15/0.73/5.62)

Factor activity

Additional information

Fer1 [FlyBase] | Fer1 [FlyMine] | Fer1 [BDGP]

H. sapiens orthologues1

PTF1A (HGNC:23734, ENSG00000168267)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTTTTCCATGGACAATTTCGACTTGGAGGCCACGATGGCGCGCCACTTCTTCGAGGGATCGCAGGCCACCAACGCCTCCACCTCCAGCTCCGACTATTTTTTTGGGGACGAGCACAGCTCGGAGAGCGATGACGAGGACGATGCCTATAGCAGTGGCTTCAACAGCGACCAGGAGAACACCGAGAAGACCCGGCGGAGCCACAAGCCCCGGCGCTTGAAGTGCGCCTCCCAAATGGCCCAGCAGCGGCAGGCGGCCAATCTCCGCGAGCGCCGCCGGATGCAGAGCATCAACGAGGCGTTCGAGGGTCTGCGCACCCACATTCCCACGCTGCCCTACGAGAAGCGACTAAGCAAGGTGGACACACTCAAGCTGGCCATAAGCTACATAACCTTCCTCAGCGAGATGGTCAAGAAGGACAAGAACGGCAACGAGCCGGGCCTAAGTCTGCAGCGTAACTACCAAAAGGAGCCGCCCAAGAAAATTATCCTCAAGGATCGCACTGGCGGCGTGGCGCACTCGTTGTCCTGGTACCGCAAGGGTGACCGATATCCGGGCAGTAAGCTCTACGCCAGGACCTGGACACCGGAGGATCCACGGGGACCCCACTCGCAGCCCCTGCCGCTGTACAACAACAGCAACTCGAATCAGAATCAAAACAGCAACCAGAGCAGCGACGATTTCAGCGGAAGTGGTGCGGATATGTCGGATCCTGGAGCTGCGGCCAGTATTTTCAGCAGCGGCAGTGGCATG

CDS AA Sequence2

MFSMDNFDLEATMARHFFEGSQATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRYPGSKLYARTWTPEDPRGPHSQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSSGSGM

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.