Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Ssb-c31a (FBgn0015299) TF
 
(0.08/-1.72/1.00)

Factor activity

H. sapiens orthologues1

SUB1 (HGNC:19985, ENSG00000113387)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCCCAAAACAAAGAAGAAGGATTCGTCCTCAGATAGCGATAGCGGTCCAGATGATCGTATCAAGCCGGCAAGCAAGAAGGCGAAGGAATCTGATGCTCCAAATTCAGATCCAAAAGATTCGGGCGAAAATGGTGCTACATCTTGGACCCTGGAAGGACTTCGCCAGGTGCGAATCAACGAGTTCCGCGGTCGCAAATCGGTGGACATTCGAGAGTTCTACGATAAGGGCGGCCAAATTCTTCCCGGCAAGAAGGGCATCTCCCTATCTTTAATTCAATGGAAGAAACTCCTTGAAGTGGCCGAAGAAGTCACCCGCGCGATCGAGAAT

CDS AA Sequence2

MPKTKKKDSSSDSDSGPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYDKGGQILPGKKGISLSLIQWKKLLEVAEEVTRAIEN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.