Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Brd8 (FBgn0039654) cofactor
 
(0.71/-0.76/2.73)

Factor activity

Additional information

Brd8 [FlyBase] | Brd8 [FlyMine] | Brd8 [BDGP]

H. sapiens orthologues1

BRD8 (HGNC:19874, ENSG00000112983)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCTGCCGGGGTACAAGCGCGCCTGCAACTGAGCCGCATGCCGCTGGACACGTGGTCGAAGCGGGAGCAGCTCATCCTGGCGTCGGCGGTCTCCTGCAGCGGCGACCAGAACTGGATCACGGTGAGCCGCACGCTGAAGACGATCTGCGGCAATGGCAGCAGTAACCGACCGGCGGACTGGTTCTCGCAGAAGAACTGTGCCATGCAGTACGGCAATCTGCTGGAGAGCGTGGAGGCCACCAAGCGCAAGAAGCGCAGCAGCGAAAGCAGTGCCGGCGTCTCCTCGCCGGCCACCGTGGAGACGCCCACAGAATTGCTGCTCCGTCGGCTCACGGAGGAGCGTCAGGCGGAGATCAAGGCGCAGATGCGTCAGGATCAGGAGACTTACCGACGCATCCAGCGGGAGATTGAGTCGCTGCAATCGGACGCGGTGACCGAGCAGGAGCTGCAGGACATGTGGCTGGAGATCGAGAAGGAGCAGGAGGCGCGCCGCATCGAGGAGATGAAGCTGGAGAATCGCATGCGGGAGCGCGAGCAGCGCAAGAAGGACCTGGCCAGCAACTGGCGAAACAGCAGTCTAGCCGTCAAGCGTTCCAACCAAGCTGCCGACACGACTTCCGTCGATATGGACGTGGAGGACATAAACACCAGTGGCAATGGCAAACAGCAGACGGGTCCTTCGCCTCTACTCACATCTCTCCTGAAATCGCCCACAGGCAATGCACCTGCAACGCCCACCCCAGGAGGAGCTGCACCAGCAGCCGGAGGAACTGGCAGCGTGGCCAGGGCTACGGCGCCAACCATCACCTCGCTGCTGACCAGCGGTCCAAGCTCAGCTGTTGCCAATCAGCCAGTCATCACCATGAAGAGCCCCACAGATGCGGCGTTTATGTCCCGACCTATTACCGGACCTCCGGCCAGTGAGGCTTCTACTACGCCCACACTCGAACGGAGTCCCTCGCAGGCGGCACCCACACTCTCCATGCTGCTAGAGAAGAACATGGCTGCGGCGAAGGCCAACGAAAGCGGAAGCTTGGTAAAGCCAGAGGGGTCAGGAAACCAGGAGCAGGGTGTAGACGAAGCCACTTCTTCTGCAGCTGGCACAGCAGACTCCGACGAGGCGGATCCCAACGAAGCGCAGCTGCTGGAAGTCTTCAAAAACATTGATCAAATAATAGATGACATCGACATTGATATGGCCAGTGTCATTGACGATGAGATTCTGAAAAATGTGGATGACGTCGTAGCCTCGCCATCAAACGATAAAGCCGAAGTTATTGACTTTGAGGACAAGCTGGACGCTTTGAAGCGGGAGCAAAGTAAAAGTTCCCCAGCCAGTGATAAACCAAAATCTGTGGAGCTAGTAATTGGATCCAGCGATGACTCCAACGACAATATACCCCTGGCTGCCGTGGCCTCCCAGGAGAGTAAGGATCGTGGTCAGTCCGGTGGTGAATCTACTAGGGGCACCGAGGACGCAGAGTCCGAGCCGTTGACCAGCGAGGTGGCGGTGGAGGAGATTGGTGAGACCATTACCATTATCAGCACTTCAAGTGAGGATACTGCAGGATCGCCACCCACGAAAATGGAGGAAGATGGGGCCACTGATTCCCTTCCGAAGAAGGAGGATGCCGCGGAAGACAAATCCGAACAGGAAAGTAGCTCCCAAGGACAAAATAAGGCAGGAGGAAGCACGGACGAGCCGGAACTAATAGATCACCAAGCCACTAGGGAAGCACAAAGCAAGTCAGGCAAGGACACAGCGGGAAAGCCAGTAACAATGCAAGAAAAGACGACCACTCAGTCCGCTCCGGTTCCTGTGGATCTGCACGACACAGACGAGGAGTCGTCTTCGTTGACGGACAGCAGCAAGCACGATGACCATCCAAGGAGTGCAAAAGCTAAGCCCCCGGCATTGAAGCTGGCTCTGGATGACTCCAAGTCGGAACTGGAGCTGAGTGGCACACCTCAGCCACCGTCGGCGCCAGCTCGAACGCCTTTGCTACGAAAACTGCCGCATCGGGATCGGTCCGAAAGTCCAATGGTGGACGATGACGCCACAACAGCCAGCGATCATTCCACTGCTAGGTCCACACGTCGCCGCTGCTCCTCCACGCCCGTTATCGACAGCATACCCAATTCTCCCGCCTCCAGCGAGCACACCGACGATCGGAGAGAAACGCGAGCCGCCTCCAAGAAGCTCTTCCTGTCCATTTATGCCATGTTGCTGGACAGCAAGCATGCGGCTCCCTTTAAGCGTCCCTTCCACGACGAGCACGCCCAGCGACATGCGGATCTATGCCTACGCCCCATGGATTTCCCCACCATCAAGCGGAACATCGACTCGGGATTCATTCGCAGCTTGAGCGAGCTGCACAGGGATGTCCTGCTCATGGCCCACAACGTTTTGGTGGCCTACAAACCACACACGGCTCAGCACAAAACGGCGCGTTTGTTCGTGCAGGACTGTCAGGCGATCAAAGAGTTCTCCCAATTGCCGGACGTGCAGGCAGGGATCACGGCCACGCCGGTGAGCAACACGGGAAGCTTGCGAGCGGATAAATCGAGCGGAAGCAAGGCCAGGAGCGGCTCCCGAAAGAGCCAAAGGCATCAC

CDS AA Sequence2

MSAGVQARLQLSRMPLDTWSKREQLILASAVSCSGDQNWITVSRTLKTICGNGSSNRPADWFSQKNCAMQYGNLLESVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQAEIKAQMRQDQETYRRIQREIESLQSDAVTEQELQDMWLEIEKEQEARRIEEMKLENRMREREQRKKDLASNWRNSSLAVKRSNQAADTTSVDMDVEDINTSGNGKQQTGPSPLLTSLLKSPTGNAPATPTPGGAAPAAGGTGSVARATAPTITSLLTSGPSSAVANQPVITMKSPTDAAFMSRPITGPPASEASTTPTLERSPSQAAPTLSMLLEKNMAAAKANESGSLVKPEGSGNQEQGVDEATSSAAGTADSDEADPNEAQLLEVFKNIDQIIDDIDIDMASVIDDEILKNVDDVVASPSNDKAEVIDFEDKLDALKREQSKSSPASDKPKSVELVIGSSDDSNDNIPLAAVASQESKDRGQSGGESTRGTEDAESEPLTSEVAVEEIGETITIISTSSEDTAGSPPTKMEEDGATDSLPKKEDAAEDKSEQESSSQGQNKAGGSTDEPELIDHQATREAQSKSGKDTAGKPVTMQEKTTTQSAPVPVDLHDTDEESSSLTDSSKHDDHPRSAKAKPPALKLALDDSKSELELSGTPQPPSAPARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSEHTDDRRETRAASKKLFLSIYAMLLDSKHAAPFKRPFHDEHAQRHADLCLRPMDFPTIKRNIDSGFIRSLSELHRDVLLMAHNVLVAYKPHTAQHKTARLFVQDCQAIKEFSQLPDVQAGITATPVSNTGSLRADKSSGSKARSGSRKSQRHH

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.