Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
pont (FBgn0040078) cofactor
 
(-0.43/-0.99/0.24)

Factor activity

Additional information

pont [FlyBase] | pont [FlyMine] | pont [BDGP]

H. sapiens orthologues1

RUVBL1 (HGNC:10474, ENSG00000175792)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAAGATCGAGGAAGTCAAGAGCACCGTGCGCACCCAACGCATCGCAGCCCACAGCCATGTGAAGGGATTGGGCCTGGACGAGGTTGGAGCTGCCGTGCACAGTGCAGCCGGACTGGTGGGTCAGAAGGCGGCACGCGAGGCAGCCGGCATTGTGGTGGACCTCATCAAATCGAAAAAGATGGCCGGACGAGCGCTTCTGCTGGCTGGGCCACCAGGCACGGGCAAAACCGCCATTGCTCTGGCCATTGCCCAGGAGCTGGGTAACAAAGTGCCCTTCTGTCCCATGGTCGGATCGGAGGTATTCAGCAATGAGATCAAGAAGACCGAGGTGCTAATGGAGAATTTCCGGCGCTCCATTGGTCTGCGCATTCGTGAGACCAAAGAGGTGTACGAGGGCGAGGTTACGGAACTCACGCCCGTGGAAACCGAGAATCCTATGGGTGGCTATGGCAAGACTATCAGCAATGTCGTCATCGGCTTGAAAACAGCCAAGGGAACCAAGCAGCTCAAGCTGGATCCCAGCATCTTTGATGCCTTGCAAAAGGAAAAGGTGGAGGTGGGCGATGTCATCTACATAGAGGCCAACAGTGGTGCCGTAAAGCGTCAGGGTCGCAGTGACACCTTTGCCACTGAGTTTGATCTCGAAACCGAGGAGTATGTGCCGCTGCCCAAGGGCGATGTCCACAAGAAGAAGGAGGTTATCCAGGATGTTACTCTGCACGATCTGGATGTGGCCAATGCTCGTCCACAGGGCGGCCAGGATGTGCTCTCCATGATGGGCCAGCTTATGAAGCCGAAGAAAACTGAAATCACTGACAAACTACGCATGGAGATCAACAAGGTGGTAAACAAGTACATTGACCAGGGCATAGCCGAGCTGGTTCCCGGAGTTCTCTTCATCGATGAAATTCACATGCTTGATTTGGAGACCTTCACCTACCTACACAAGTCCCTGGAATCTCCCATTGCACCAATTGTGATTTTTGCCACCAATCGTGGACGCTGTGTTATTCGTGGCACCACCGACATAGTTTCGCCGCACGGAATTCCGCTAGATCTGCTCGATCGTTTGCTGATCATCCGCACACTACTCTACTCCACTGCCGACATGGAGCAGATAATCAAGTTGCGCGCCCAGACCGAGGGACTGCAGCTGGAGGAGAACGCATTTACACGTCTCAGCGAGATTGGAACCAGCTCCACGCTGCGCTACGCCGTCCAGCTGCTGACCCCGGCTCATCAGATGTGCAAGGTGAACGGACGCAACCAGATCAGCAAGGATGATATCGAGGATGTGCACTCGCTCTTCCTTGACGCCAAGCGCTCCTCGAAGCATTTGTCCGAAAAGAACAATAAGTTTATGTTG

CDS AA Sequence2

MKIEEVKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSGAVKRQGRSDTFATEFDLETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQGGQDVLSMMGQLMKPKKTEITDKLRMEINKVVNKYIDQGIAELVPGVLFIDEIHMLDLETFTYLHKSLESPIAPIVIFATNRGRCVIRGTTDIVSPHGIPLDLLDRLLIIRTLLYSTADMEQIIKLRAQTEGLQLEENAFTRLSEIGTSSTLRYAVQLLTPAHQMCKVNGRNQISKDDIEDVHSLFLDAKRSSKHLSEKNNKFML

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.