Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Taf4 (FBgn0010280) cofactor
 
(0.29/-3.23/3.11)

Factor activity

Additional information

Taf4 [FlyBase] | Taf4 [FlyMine] | Taf4 [BDGP]

H. sapiens orthologues1

TAF4B (HGNC:11538, ENSG00000141384), TAF4 (HGNC:11537, ENSG00000130699)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAACACCAGCCAGACAGCTGCCGGCAATCGCATCACCTTCACCAGCCAGCCGCTGCCCAATGGCACCATCAGCATAGCCGGCAATCCCGGCGCGGTCATCTCCACGGCCCAGCTACCGAATACCACCACCATCAAGACGATCCAGGCGGGGATCGGTGGTCAGCATCAGGGACTTCAGCAGGTGCATCATGTCCAACAGCAGCAGCAGTCGCAACAGCAACAACAGCAGCAACAGCAGACGCAATCCGTAGGTGCCACCCAAACACAAACCCTAGTTATTAAATCCAACCACCATGCTGTCACCCTGCCGGCGGGTCTAGTCTCAAGTGCACCAGCAGGAATCATAACCATGACCAAGACCATCAATCAGGCCGGTCAACCGCTGCTCAATTCAATGCTGCCGGCTGGCGTGGTGGTGGGCATGCGCCAACAGGCGCCGTCACAGCAGCAGCAGAAGAATGTGCCCACCAACCCGCTCAGTCGCGTGGTGATCAACTCCCACATGGCGGGCGTGAGACCGCAGAGTCCATCGATAACTTTAAGCACACTTAATACGGGTCAGACCCCGGCATTGCTGGTCAAGACGGATAACGGATTCCAGCTGTTGCGCGTGGGCACGACGACGGGTCCGCCGACGGTGACACAGACTATAACCAACACCAGCAATAACAGCAACACGACAAGCACCACAAACCATCCCACAACCACACAGATCCGTCTGCAAACTGTGCCGGCTGCAGCTTCTATGACCAACACGACCGCCACCAGCAACATCATTGTCAATTCGGTGGCAAGCAGTGGATATGCAAACTCTTCGCAGCCGCCGCATCTGACGCAACTAAATGCGCAGGCGCCACAACTGCCGCAGATTACGCAGATTCAAACAATACCGGCCCAGCAGTCTCAGCAGCAGCAGGTGAACAATGTAAGCTCCGCGGGAGGAACGGCAACGGCGGTCAGCAGTACGACGGCAGCGACGACGACGCAGCAGGGCAATACCAAAGAAAAGTGTCGCAAGTTTCTAGCCAATTTAATTGAATTGTCGACACGGGAACCGAAGCCGGTGGAGAAGAACGTGCGCACCCTCATCCAGGAGCTGGTCAATGCGAATGTCGAGCCGGAGGAGTTTTGTGACCGCCTGGAGCGCTTGCTCAACGCCAGCCCGCAGCCGTGTTTGATTGGATTCCTTAAGAAGAGTTTGCCTCTGCTACGACAAGCCCTCTACACAAAGGAGCTGGTCATCGAAGGCATTAAACCTCCGCCGCAGCACGTTCTCGGCCTGGCCGGACTCTCTCAACAGTTGCCTAAAATCCAAGCGCAAATCCGTCCGATCGGTCCTAGCCAGACAACGACCATTGGACAGACGCAGGTGCGTATGATAACGCCGAATGCCTTGGGCACGCCGCGACCCACCATTGGCCACACCACGATATCGAAGCAGCCACCGAATATTCGGTTGCCTACGGCCCCGCGTCTCGTCAACACTGGAGGAATTCGCACCCAGATACCCTCGTTGCAGGTGCCTGGTCAGGCGAACATTGTGCAAATACGTGGACCGCAGCATGCTCAGCTGCAGCGTACTGGATCGGTCCAGATCCGGGCCACCACTCGTCCGCCAAACAGTGTGCCCACCGCGAACAAACTCACTGCCGTCAAGGTGGGACAGACGCAAATCAAAGCGATTACGCCCAGCCTGCATCCACCCTCGCTGGCGGCAATCTCAGGTGGACCACCGCCGACACCCACGCTGTCTGTTTTGTCTACGTTGAACTCCGCCTCGACCACAACGCTGCCCATACCATCGTTACCCACGGTCCACCTTCCCCCCGAAGCTCTTCGAGCCCGTGAGCAGATGCAAAATTCGCTGAACCACAACAGCAATCACTTCGATGCAAAACTGGTGGAGATCAAGGCGCCGTCGCTGCATCCGCCGCACATGGAGCGGATCAACGCATCTCTCACACCGATTGGAGCCAAGACGATGGCAAGGCCGCCGCCTGCGATCAACAAGGCGATAGGCAAAAAGAAACGCGACGCCATGGAAATGGACGCCAAATTGAACACATCGAGCGGAGGAGCGGCGTCCGCTGCGAACTCGTTTTTCCAGCAGAGCTCCATGTCCTCGATGTACGGTGACGATGATATCAACGATGTTGCCGCCATGGGAGGTGTTAACTTGGCGGAGGAGTCGCAGCGAATTCTCGGCTGTACCGAAAACATCGGCACGCAGATTCGATCCTGCAAAGATGAGGTATTTCTCAATCTCCCCTCGCTGCAAGCTAGAATACGGGCAATTACTTCGGAGGCGGGACTGGATGAGCCGTCGCAGGATGTGGCCGTTCTGATATCGCACGCCTGTCAGGAGCGCCTGAAGAACATCGTTGAGAAGTTGGCTGTGATAGCGGAGCACCGCATTGATGTCATCAAGTTGGATCCACGCTATGAGCCCGCCAAGGATGTGCGCGGTCAGATCAAGTTTCTCGAGGAGCTGGACAAGGCCGAGCAGAAGCGACACGAGGAACTGGAGCGTGAGATGCTGCTGCGGGCAGCCAAGTCACGGTCGAGGGTGGAAGATCCCGAGCAGGCCAAGATGAAGGCGAGGGCCAAGGAGATGCAACGCGCCGAAATGGAGGAGTTGCGTCAACGAGATGCCAATCTGACGGCGCTGCAGGCGATTGGACCTCGGAAAAAGCTGAAGCTAGACGGCGAAACAGTCAGTTCGGGAGCGGGTTCAAGTGGCGGCGGAGTGCTAAGCAGCTCGGGATCTGCGCCGACGACGTTACGACCTCGCATAAAACGTGTGAACCTGCGCGACATGCTCTTCTACATGGAGCAAGAGCGGGAGTTCTGTCGCAGTTCCATGCTGTTCAAGACATACCTCAAG

CDS AA Sequence2

MNTSQTAAGNRITFTSQPLPNGTISIAGNPGAVISTAQLPNTTTIKTIQAGIGGQHQGLQQVHHVQQQQQSQQQQQQQQQTQSVGATQTQTLVIKSNHHAVTLPAGLVSSAPAGIITMTKTINQAGQPLLNSMLPAGVVVGMRQQAPSQQQQKNVPTNPLSRVVINSHMAGVRPQSPSITLSTLNTGQTPALLVKTDNGFQLLRVGTTTGPPTVTQTITNTSNNSNTTSTTNHPTTTQIRLQTVPAAASMTNTTATSNIIVNSVASSGYANSSQPPHLTQLNAQAPQLPQITQIQTIPAQQSQQQQVNNVSSAGGTATAVSSTTAATTTQQGNTKEKCRKFLANLIELSTREPKPVEKNVRTLIQELVNANVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQALYTKELVIEGIKPPPQHVLGLAGLSQQLPKIQAQIRPIGPSQTTTIGQTQVRMITPNALGTPRPTIGHTTISKQPPNIRLPTAPRLVNTGGIRTQIPSLQVPGQANIVQIRGPQHAQLQRTGSVQIRATTRPPNSVPTANKLTAVKVGQTQIKAITPSLHPPSLAAISGGPPPTPTLSVLSTLNSASTTTLPIPSLPTVHLPPEALRAREQMQNSLNHNSNHFDAKLVEIKAPSLHPPHMERINASLTPIGAKTMARPPPAINKAIGKKKRDAMEMDAKLNTSSGGAASAANSFFQQSSMSSMYGDDDINDVAAMGGVNLAEESQRILGCTENIGTQIRSCKDEVFLNLPSLQARIRAITSEAGLDEPSQDVAVLISHACQERLKNIVEKLAVIAEHRIDVIKLDPRYEPAKDVRGQIKFLEELDKAEQKRHEELEREMLLRAAKSRSRVEDPEQAKMKARAKEMQRAEMEELRQRDANLTALQAIGPRKKLKLDGETVSSGAGSSGGGVLSSSGSAPTTLRPRIKRVNLRDMLFYMEQEREFCRSSMLFKTYLK

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.