Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
His2Av (FBgn0001197) cofactor
 
(1.33/-1.30/3.09)

Factor activity

Additional information

His2Av [FlyBase] | His2Av [FlyMine] | His2Av [BDGP]

H. sapiens orthologues1

H2AFV (HGNC:20664, ENSG00000105968), H2AFZ (HGNC:4741, ENSG00000164032)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCTGGCGGTAAAGCAGGCAAGGATTCGGGCAAGGCCAAGGCGAAGGCGGTATCGCGTTCCGCGCGCGCGGGTCTTCAGTTCCCCGTGGGTCGCATCCATCGTCATCTCAAGAGCCGCACTACGTCACACGGACGCGTCGGAGCCACTGCAGCCGTGTACTCCGCTGCCATATTGGAATACCTGACCGCCGAGGTCCTGGAGTTGGCAGGCAACGCATCGAAGGACTTGAAAGTGAAACGTATCACTCCTCGCCACTTACAGCTCGCCATTCGCGGAGACGAGGAGCTGGACAGCCTGATCAAGGCAACCATCGCTGGTGGCGGTGTCATTCCGCACATACACAAGTCGCTGATCGGCAAAAAGGAGGAAACGGTGCAGGATCCGCAGCGGAAGGGCAACGTCATTCTGTCGCAGGCCTAC

CDS AA Sequence2

MAGGKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKEETVQDPQRKGNVILSQAY

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.