Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CoRest (FBgn0261573) cofactor
 
(-2.42/-6.08/-1.50)

Factor activity

Additional information

CoRest [FlyBase] | CoRest [FlyMine] | CoRest [BDGP]

H. sapiens orthologues1

RCOR2 (HGNC:27455, ENSG00000167771), RCOR3 (HGNC:25594, ENSG00000117625), RCOR1 (HGNC:17441, ENSG00000089902)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGTGTTGGCGGAGCGCAACACCACGGATGTGGTGCGCAACGGGCGCCGTTCGCGCGGCCCCAGTCCCAATACGCACACCACGGGCGGCGTCACCAACAGCGCCAGCCTCGTGGGCAGCGGCAACAACAGCGGCCACTCCGGGAACGCCAATGCGAACGAGAAGACCACCACAGCTGTGCCAGGTGCAGGCACGCCGGAGAGCTCCGACGACGACAACTCCACCAAACGGAACGGCAAGAGCAAGGCCAAGCAGTCTGAGTACGAAGAGAAAATCCGCGTTGGACGCGACTACCAGGCGGTTTGTCCGCCGCTCGTTCCGGAAGCGGAGCGCCGCCCGGAACAAATGAACGAACGCGCCCTCCTCGTATGGTCGCCCACCAAGGAGATTCCTGATCTGAAATTGGAGGAGTACATTTCGGTGGCCAAGGAAAAGTACGGCTACAACGGCGAACAGGCATTGGGCATGCTGTTCTGGCACAAACACGATCTGGAGCGTGCCGTAATGGACCTGGCCAACTTCACGCCCTTCCCGGACGAGTGGACCATCGAGGACAAGGTGCTGTTCGAACAGGCCTTCCAGTTCCACGGGAAGAGCTTCCACCGCATCCGCCAGATGCTGCCAGACAAATCCATAGCCAGTTTGGTCAAGTACTACTACTCGTGGAAGAAGACGCGTCACCGCAGCAGCGCCATGGATCGCCAAGAAAAGGCCATCAAGGCGGTGGTCAAGGATGGCTCCGAGAACGGCAGCGAGGTGGGCAGCAACGAGGAGTCTGATAACGATGACAAGATACAGAAGAATAGGCAAGTAATGGAGCAGCTAGACAAGGAGTGCGAAACCATCAATGTGGATGATGTGCTTTCCAAGCCGGCGGCAGCCAACACCGAATCTGCCCAGCCACGCATCTCTGCCCGTTGGCTGCCGGATGAGATCCAAGTGGCATTGCTCGCGATCCGCGAGTATGGAAAAAACTTTCCTACGATTGCCAAGGTGGTGGCCACCAAAACGGAGGCGCACGTGCGCACCTTTTACTTAAACAATCGGCGCCGCTACAATCTCGACCAGATCGTAAAGGAGTACGAGGCTGGCAAGTCCGAGGAGTCGGGCGCAGAGGAGCAGACCGAGCCTGCTGTCGACGCAGCCGCGGCTGGCGCCGCAACAGCATCTGCGCCCAGCGCGGCTGATTCTACATCCGCCGCGAGCGCGACAGCAGACAGGAAACAGTCCACCGAAAACAGCAACAACGGAGTTGAGACCATGCAGGAATCGTTGCCCAAGAAGGAGGACCCAAAGAAGCCGGAGCTGGCAGCGGCTGTGCTCAAGATTGGCGTGGCCGAGGCAGCGGATACCGTGGCCACTGTGGCATCCAGCACAGCCTCTGGCGTCATCGGTGCCGCCACCTCCGCCAGCAAGCCCAGCACCAGTGCTACAATCACCATTATAGATGAGTCTGACACGGCCACGAACTCGAGCAGCGACGTTGTGACCACTGGACTTGCCACAGCCACCGGCTCGTCCGCACTGTCCAGCACAACTAGTGCGCCCGCATCCAAAACGCAGACCAGCAGCGAGGAGTTGTCCGCTCAGAAATCCAATCCCGCGAGCGGGATCGCAGCCATAGGTGCTGCAACGGGCAGTGGCCAGACTGCCAACAGCTCTGGCAGCAAGCGGGATAGCTCTGTATTGCCCGTCGCCGAGCAGCCGCCGGCGAAGAAAATCGCGCTCAGCACCGGAGGCGGAAGCAGCGTCGCAGAGTTCCTGGCCAAC

CDS AA Sequence2

MVLAERNTTDVVRNGRRSRGPSPNTHTTGGVTNSASLVGSGNNSGHSGNANANEKTTTAVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRDYQAVCPPLVPEAERRPEQMNERALLVWSPTKEIPDLKLEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKAVVKDGSENGSEVGSNEESDNDDKIQKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPRISARWLPDEIQVALLAIREYGKNFPTIAKVVATKTEAHVRTFYLNNRRRYNLDQIVKEYEAGKSEESGAEEQTEPAVDAAAAGAATASAPSAADSTSAASATADRKQSTENSNNGVETMQESLPKKEDPKKPELAAAVLKIGVAEAADTVATVASSTASGVIGAATSASKPSTSATITIIDESDTATNSSSDVVTTGLATATGSSALSSTTSAPASKTQTSSEELSAQKSNPASGIAAIGAATGSGQTANSSGSKRDSSVLPVAEQPPAKKIALSTGGGSSVAEFLAN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.