Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
zfh1 (FBgn0004606) TF
 
(-0.48/-2.09/0.27)

Factor activity

Additional information

zfh1 [FlyBase] | zfh1 [FlyMine] | zfh1 [BDGP]

H. sapiens orthologues1

ZEB1 (HGNC:11642, ENSG00000148516), ZEB2 (HGNC:14881, ENSG00000169554)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCGGCGGCCGCTTGCCTACTGTCTTCTTCTACTTCTTCGTTCGAGAAGACCTGCCGCATCTGCCACAAGGCCTTCGCGAACGTCTACCGCCTGCAGAGGCACATGATCAGCCACGACGAGAGTGCGCTGCTGCGGAAGTTTAAGTGCAAGGAGTGCGACAAGGCCTTCAAGTTCAAGCACCACCTCAAGGAGCACGTGAGGATCCATTCCGGCGAGAAGCCCTTCGGATGCGACAACTGCGGCAAGCGATTCTCGCACTCGGGCAGCTTCTCCTCCCACATGACCTCCAAGAAGTGCATCAGCATGGGCCTCAAGCTGAACAACAATCGCGCTCTGCTGAAGCGACTGGAGAAGAGCCCGGGATCCGCATCCTCCGCATCCCGGCGATCGCCCTCCGATCACGGAAAGGGCAAGCTGCCGGAGCAGCCGTCGCTACCGGGACTACCACATCCGATGAGCTACTTCGCCAGCGATGCGCAGGTGCAAGGTGGAAGTGCGGCACCCGCGCCCTTCCCGCCATTCCATCCGAACTACATGAACGCGGCCCTGCTCGCCTTTCCCCACAACTTTATGGCGGCTGCAGCTGGCCTGGATCCTCGGGTGCATCCCTACAGCATCCAGAGGCTGCTGCAACTTTCCGCCGCCGGTCAGCAGCAGAGGGAGGAGGAGCGTGAGGAGCAGCAAAAGCAGCAGCAGCATGATGAGGAGGAGACCCCCGATGAGCCCAAGCTAGTGATGGATATCGAGGAGCCAGAGACCAAGGAGATGGCACCCACGCCAGAGGCCACCGAAGCAGCCACTCCCATTAAGCGGGAGGAGAGCAGGGAAGCCTCTCCCGATCCAGAGAGCTACCGTTCCTCCTCGCAAGCAATCAAACAAGAGCAGGAGCCCCTGAACGTAGCAGAGGAACGTCAAACTCCTGTGGAAGAACACGCCCCCGTGGAGCATGCCGCTGATCTGCGCTGCAGTCGCTGCTCCAAGCAGTTCAATCATCCCACTGAGCTGGTGCAGCACGAGAAGGTGCTTTGTGGCCTGATCAAGGAGGAGCTGGAGCAGCACTTCCAACAGCAACAGGCCACGTCCTTTGCCTTGGCCTCCGCCAGCGAAGAGGACGAGGAAGACGAGGAGATGGATGTGGAGGAGGAGCCCCGCCAGGAGAGTGGCGAACGGAAAGTCCGCGTGCGAACGGCCATCAACGAGGAGCAGCAGCAGCAGTTGAAGCAGCACTACTCCCTGAACGCTCGACCCAGTAGGGATGAGTTCCGAATGATAGCAGCTCGTCTGCAGCTGGATCCCCGAGTGGTTCAAGTGTGGTTCCAGAACAACCGCTCCAGGGAGCGCAAAATGCAGAGTTTCCAGAACAATCAGGCGGCAGGCGCAGCACCGCCAATGCCCATTGACTCCCAGGCATCTCTAACCCGGGAGGATCAACCGCTGGACTTGTCCGTGAAGAGAGATCCCCTCACGCCGAAGAGTGAGAGCTCGCCTCCGTATATAGCTCCACCGTCGGGAGAAGCCCTCAATCCCGAAGCAATCAATCTCAGCAGGAAGTTCTCCACATCCGCATCGATGTCGCCGGCCTCGATTTCACCGTCATCCGCGGCAGCCCTCTACTTTGGTGCTGCCCCGCCGCCTTCGCCCCCAAATAGCCAACTGGATTCCACTCCTCGCAGTGGCCAGGCCTTTCCGGGACTACCTCCCTACATGCTGCCCATGTCGCTGCCCATGGAGGCGCTGTTTAAGATGCGCCCGGGCGGAGACTTCGCTTCCAACCATGCCTTGATGAACAGTATTAAGCTGCCCGATTACCGGGGCACCAGCTTGAGTCCCGGTGGATCGGAGAAGCGTTCGTGGCGGGACGACGACTCGCGCATCTCACACGAGGACGAGTTCGGCGCCGGCGTTCTGATGCCACCGAAACCGCGTAGGGGCAAGGCGGAGACCCATGGACACGCTGGCGATCCCGATCTGCCCTATGTGTGCGATCAGTGCGACAAGGCCTTCGCCAAGCAGAGTTCGCTGGCGCGACACAAATACGAGCATTCCGGTCAACGACCCTACCAGTGCATAGAGTGTCCGAAGGCCTTCAAGCACAAGCACCACCTCACGGAGCACAAGCGTCTGCACAGCGGCGAGAAGCCCTTTCAGTGCTCCAAGTGCCTGAAGCGCTTCTCGCACTCGGGCAGCTACAGCCAGCACATGAACCACCGGTATTCCTATTGCAAGCCCTACAGGGAA

CDS AA Sequence2

MSAAACLLSSSTSSFEKTCRICHKAFANVYRLQRHMISHDESALLRKFKCKECDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNNNRALLKRLEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLPHPMSYFASDAQVQGGSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDPRVHPYSIQRLLQLSAAGQQQREEEREEQQKQQQHDEEETPDEPKLVMDIEEPETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQAIKQEQEPLNVAEERQTPVEEHAPVEHAADLRCSRCSKQFNHPTELVQHEKVLCGLIKEELEQHFQQQQATSFALASASEEDEEDEEMDVEEEPRQESGERKVRVRTAINEEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKMQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRDPLTPKSESSPPYIAPPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALYFGAAPPPSPPNSQLDSTPRSGQAFPGLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIKLPDYRGTSLSPGGSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAETHGHAGDPDLPYVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.