Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
polybromo (FBgn0039227) cofactor
 
(-1.48/-3.83/-0.82)

Factor activity

H. sapiens orthologues1

PBRM1 (HGNC:30064, ENSG00000163939)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCTGAGCCGCAAGCGCCGGGCGAGCAGCATATCCAGCCGGCAGGACGAGGATCCGCTGCAGCTGGACGACTCGACGCCGGAGCAGTCACCGGTGCAGCAGACGACGACACAATCGGCGCGAAAAAAGCGCCGTCTCGATCCCACAGAACTGTGCCAGCAATTGTACGATTCCATAAGGAACATAAAGAAGGAGGACGGTTCAATGCTGTGCGACACCTTCATCCGCGTGCCGAAGCGCCGGCAAGAGCCCTCGTACTATGACGTGGTGGTCAATCCCATTGATCTGCTCAAGGTTCAGCAGAAGCTGAAAACCGATTCCTACGACGATTTGGATGATCTGATGGCCGACCTGGAGCTGCTTATTGGCAATGCCAAGGCCTTCTACATACCGGGCAGTAGCGAGCACCAGGACGCAGTCTCTCTGTGGCAGCACATTCATTCGCAGAGACAGCGCATTATGGAGGCAAATGGATTGGCGGAGGAGGAGCCGCGTGCCAGACGCATGTCGCGCCAAGTGCGCCGAATGACCAGCAGCACTGAACCTGGTGGCGATGGAGCAACTGATGACGAGTACAACCAGTACGAGGAGCTCTTCGCCTCCGTTATGACCGCTACCGATCCCGTGGGCGATCGGTTAATGCACCGCATGTTCCAACTGCTGCCCTCCAAGAAAATCTATCCAGACTACTACGATGTCATTGAGCATCCCATTGATCTGCGCCTGATTGCGACCAAAATACAAATGAACGCTTACTCCTCGCTGGCGGAGATGGAACGGGATCTGCTACAAATGACCAAAAACGCATGTCTGTTCAACGAGCCTGGTTCTCAGATCTATAAGGACGCCAAATCCCTGAAACGGATCTTTACGCAGCGGCGTATTGAGCTGGAGATGGGCAAAGGCAAGCTGGCTAAGCGCGTCAAGAGTCTCTCCAGTGCAGCAATTGCTGCACTAAAAGAGGAGGTTGACAGCTCGGACGACGAGGAGACCAGCAAAAAGGGCGAGGGGCCCATGTGGGCATTGTTCGATCACTTGTACAACGCACCAGGAACTTCGGAACATCCGGGAGTTACTGGTCCTCCATTGGGAAACTCTCTATGGAAACTGCCAGTTCGTCGTTTCCATCCCGAATATTTTGAGCTGATCAAACGACCCATATCTATGAGCCAAATCCACACAAAGCTCAAAAAGGGCGATTATGCGAACATTAGTGATCTCACCGCCGATCTATATCTCATGCTGGACAACGCCAAAAAGGCGTTTCCGACGTCCCATCGCACTCACAAGGATGCGCTGAAAATGTTAAAGCTAATGAATGCCAAGCTGGTGGAGGAGTCTCTCGAGGAGGGCAGTGATCTGGATGACGAGGATGCAGAGGAAATGGACACAGAGGTATTTACGGTTAGCACGCAGCCGGAAAAGCGCAAGCCGGGCAGACCCCGCATCAACTCCAATTCGAACTCTAACGCCTCCCATACACCAAATAACTCGAATTCACCCAAATCAAATCGCATTGCCATCAACGCGGCTATTAAAAAGAAGATTCTGAGCATACAGAAATATTTGGTGGACTACTCCTTGGGCAATCGTCGTCCCATCGAAATGTTTATGGAAAAGCCGCCTCGCAAGATTTATCCGGACTACTACGATATCATTCAAAACCCCATTGACATGAACACTATCGAGCATAACATTCGCACAGATCGCTATGCCGCCGTGGAGGACGTGGTATCCGACTATCGACTTATGTTTTCCAACTGCCGACAGTATAATGAGGAGGGCTCTAACATATACGAGGATGCCAATATATTGGAACGAGCTCTAAATGAAAAGCTCAAGGAGTTCCCTGGTCTTACAGAGGGCAAAAAAAGCCAGCAGAAGTACAGCAAGGTGGGAAGAAAGTTAAAGACCGCTGTAATTACAGAGCGGCTGTGGCAATTCTATGAAACAGTAAAGGAGTACCAGGAGCCCAAGGGTAAGAGGCAGCTGTCGCTTATATTTACGAAGTTGCCATCCAAGAGCGAGTATCCGGACTACTACGACATTATCAGGGAACCTATTGACATGGACCGAATCGCTCAGAAACTTAAACAGGGCGCTTATGATACCTTAGATGACTTGGCAGCGGACTTTCTGCTGATGCTGGAGAACGCCTGCAAGTATAACGAGCCAGACTCGCAGATCTACAAGGATGCGCTCGTGCTACAACAATTGACACTGCAGCTGAAGCAACAACTGCGCACCGAGCGCGATTCTCTTCCGGATGTTCCTTTGGCTGTTCAGGAGCTGTTCCTCACACTGTTCACGACTATTTACAATCACCAGGACGAGGAGGGACGTTGCTACTCGGATTCCCTGGCCGAACTGCCGGAGTACGATGAGATTGGCGAAGGACCCAAGGTTCGCGGCATTTCGCTGGACCTTGTAAAACGAAGGCTTGACAAAGGAGCTTACAAACGGCTTGATGTTTACCAGGAAGATATTTTTGCCTGTTTGGAACGTGCAAGAAAGTTGTCCCGCACAGATTCGGATATTTTTCAGGACTCCATCGAGTTGCAAACATACTTCATTCGCAAGAGAGACGAGTTATGCAAGGACACACTTAGCTCATCCGCTTTAAATTTTAGTCTAGAACGCCTTATGGCTGATGTGGAGCTGTGTCGCCAGCAAAAAATGCAACAAGAGGAACAGGACCAAGAGCAGGATAAGGAGAAGGATGAATTCAATGCAGCCAAGGGTGAAAGCATGACAATAAACCAGCAGGTGTTTTCTCCCGGCGATTACGTATACGTGCAAATGCCGGAGAACAAGATTCCCTCGATATGCTGCATAGAGCGCCTCTGGACATCACCCACCAATGAGAAGCTGATGCAGGCTTCGATCTTTGTACGGCCCCACGAAACGTACCATGTAACCACTCGCAAGTTCCTCGAAAAGGAAGTGTTCAAGAGCAGCCTTTCGCAGACCATCTCGATGGATAAAGTGCAGGGCATGTGCTACGTAATGAACATAAAGGATTACATCAAGATGCGTCCGGAAAACTTGCCTGAAAAGGATGTTTACGTTTGCGAGTCTCGTTACAATATCCAAGGTCGCTGGTTCAAGAAGCTGAAGAGCTGGCCGCCAGTCCGTGAAGGCAGCTCGGTGAAGTTCGTTCCACGAGAGCAGCCATTGGAGTTAAAACGTGTGATGTCTGTGTTTAAGGAGCGTTTGGAAAAGCACAAAGGAGAACTGGAGGAGCTGAAGCTCCAAGAGACGCTGGTCGAAAAGGAGAAACCAAATGTGTCTTGCGATCCGCCGCCAAATGCTGAGGTTGGCAGCACGTACTACCAGCAGTACAACACCATTTGCAGTGGGGCCATAAAAACGGGAGACTTTGTTTACGTGGCCACCCAAACAGGAAAGCAGTCGGTGGCACAGGTCCAGCAGATTTGGGAGCAGAATGGAAAATCATACTTTAAAGGTCCATGGCTGTTACCACCCAGCGAGACGACCCCCGGCTTGGGCAAGCAATTTTATCGCCAGGAACTGCTGCTGAGCACAGTCGAAGAGGTCAGTCCGGTGGTGGGCATCGTGGGTCGTTGCGCCGTCCTGGAGTACTCCGAATTTATCAGCTCCCGACCCACGGAGATATCCGAAAGCGATGTGTACATTTGTGAGTCCGTCTATGATGAGCTAAAGAAAGCTCTTCGCAAGTTGGTTACGGGCAACATGCGCAAGTTCCAACACAGTCCTTCTGTCACCGAGGATGAGATCTTTTACTTTAAGACTCCCATTAAGCCCTCCAAGGACTTTAAGAACGAATTGAATGAACTGGGCATGCTAGAGGATTCAATGGATGGGGATACACCCTCGCTGAGCTCAGACATTGCGGCCATGTCCTCGCCGGCTCCTTCAGTAAACTCCACGCCACTGACGTCCAAAGTTAAGGCCGCCAAATCGGCCAAAAAATGTCTTACCGGTTACATTTTGTACTCTAGTGAAGTTCGAAAAAGCATTTGCCAGAGCAACCCGGACGCAACCTTTGGAGACATATCCCGCATGGTGGGCACCGAATGGAAGAATCTGCCCTCCAGCGTTAAGCAGAGCTGGGAGGATAGGGCTAGCCGACAGAATGAGGAGACGGCGGCCCTACGGCGCGAGTTGGACGACGTCCAGAACAGTGCGAGTCCCTCATCCCAAGTTTCGCAGGATGTCTTTGGACAGGTGCTCACCTTTGAGTGTCAGTGGGATAAGTGCGACTTTCAGTTCGAGGAGCTTAGCGACTGCACGGAACATTGCATGTCCGATAGCACCGGACACATCCAGCGCCATCCACAAGCGGGCGTGGAGACGGAGTATGTCTGCCTGTGGCGCAACTGCCCGCGGGTCAAGAAGTCTGTTCAGGCCTTTCCTAACGTTCTGCGCCTCATCAAGCATGTGCGCGAGGTCCATCTGAGCAAGTGTGGCAAGACGATTTCGGCGGCAGACCGCAGCAAGAATTTCGTGCCGCGTCGGCAGAAGCATGCGCAACTGGCCACTACTGTGCCCATCCCGCCCAGCCTTGCGCAATCGCCGCGCGCTCCAAGCAATCTCGAGGCAGTGCAGCTCCAGCAGCAGCAGCATCCGCAGCAGAACATGCACCAACTGCAGCAACAGCAAACGATCGTCTTGGGTCCGCCACCAGAGCCGCTCTTCGTCACAGTGCCGCCGCGCACCACTCGCGTCATCCACTCGGAGGCCTACATTAAGTACATCGAGAGCCTGCAGACGGGCAGCCATCTGAACGTGGTCACCTGCAACAACAATTGGCGGCGTGCACTGACCCACATCACACCCGCACAGGTGGTGGCCAAGACGGCGCTACCCGAGAAGTGGATCGGACCGAATCTGCGCGACCAGGGCAACGTGGTGCAGGCACTGTGCCACCTGCGCAACTTCATGGTCGACGATATACTTCAAATACGGCGCAGTTGCAAC

CDS AA Sequence2

MLSRKRRASSISSRQDEDPLQLDDSTPEQSPVQQTTTQSARKKRRLDPTELCQQLYDSIRNIKKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDDLMADLELLIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGLAEEEPRARRMSRQVRRMTSSTEPGGDGATDDEYNQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQRRIELEMGKGKLAKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNAPGTSEHPGVTGPPLGNSLWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAFPTSHRTHKDALKMLKLMNAKLVEESLEEGSDLDDEDAEEMDTEVFTVSTQPEKRKPGRPRINSNSNSNASHTPNNSNSPKSNRIAINAAIKKKILSIQKYLVDYSLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNEKLKEFPGLTEGKKSQQKYSKVGRKLKTAVITERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVLQQLTLQLKQQLRTERDSLPDVPLAVQELFLTLFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGISLDLVKRRLDKGAYKRLDVYQEDIFACLERARKLSRTDSDIFQDSIELQTYFIRKRDELCKDTLSSSALNFSLERLMADVELCRQQKMQQEEQDQEQDKEKDEFNAAKGESMTINQQVFSPGDYVYVQMPENKIPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQGMCYVMNIKDYIKMRPENLPEKDVYVCESRYNIQGRWFKKLKSWPPVREGSSVKFVPREQPLELKRVMSVFKERLEKHKGELEELKLQETLVEKEKPNVSCDPPPNAEVGSTYYQQYNTICSGAIKTGDFVYVATQTGKQSVAQVQQIWEQNGKSYFKGPWLLPPSETTPGLGKQFYRQELLLSTVEEVSPVVGIVGRCAVLEYSEFISSRPTEISESDVYICESVYDELKKALRKLVTGNMRKFQHSPSVTEDEIFYFKTPIKPSKDFKNELNELGMLEDSMDGDTPSLSSDIAAMSSPAPSVNSTPLTSKVKAAKSAKKCLTGYILYSSEVRKSICQSNPDATFGDISRMVGTEWKNLPSSVKQSWEDRASRQNEETAALRRELDDVQNSASPSSQVSQDVFGQVLTFECQWDKCDFQFEELSDCTEHCMSDSTGHIQRHPQAGVETEYVCLWRNCPRVKKSVQAFPNVLRLIKHVREVHLSKCGKTISAADRSKNFVPRRQKHAQLATTVPIPPSLAQSPRAPSNLEAVQLQQQQHPQQNMHQLQQQQTIVLGPPPEPLFVTVPPRTTRVIHSEAYIKYIESLQTGSHLNVVTCNNNWRRALTHITPAQVVAKTALPEKWIGPNLRDQGNVVQALCHLRNFMVDDILQIRRSCN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.