Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
TfIIS (FBgn0010422) cofactor
 
(-0.70/-3.75/-0.05)

Factor activity

Additional information

TfIIS [FlyBase] | TfIIS [FlyMine] | TfIIS [BDGP]

H. sapiens orthologues1

TCEA1 (HGNC:11612, ENSG00000187735), TCEA2 (HGNC:11614, ENSG00000171703), TCEA3 (HGNC:11615, ENSG00000204219)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAGCGTGGAGGAGGAAGTGTTTCGAATCCAAAAGAAGATGAGCAAGATGGCCAGCGACGGCACAGGACAGGATCAGGCTCTGGACCTGCTGAAGGCCCTGCAAACGCTTAACATCAATCTCGACATTCTGACCAAAACGCGCATCGGCATGACCGTAAACGAGCTGCGCAAGAGTAGCAAGGACGACGAGGTGATCGCTCTGGCCAAGACGCTGATCAAGAACTGGAAACGATTCCTCGCCAGCCCGGCGCCAACCACACCGAACAACAGCTCCGCTAAGGAGGGCTCCTCCAACAACAGCAGTGCCTCGAAGTCCACCAGTGCCGCCAAGTCGTCGTCGTCAATCTCCGGCAAGGATAAGTCCAGTTCATCCAGCTCATCCAAGGATAAAGAGAAGAAAGGCTCGACATCCTCGTCACAGACCTCGTTTCCCTCCGGCGGCATGACAGATGCGGTCCGCATCAAATGCCGCGAAATGCTGGCCACCGCACTGAAGATTGGCGAAGTGCCCGAGGGATGCGGTGAGCCGGAGGAAATGGCCGCCGAACTGGAAGATGCCATTTACTCCGAGTTCAATAACACGGATATGAAGTACAAGAATCGCATTAGGTCACGCGTGGCCAATCTGAAGGACCCCAAGAATCCTGGATTGCGCGGCAACTTTATGTGCGGCGCCGTCACTGCCAAGCAGCTGGCCAAAATGACGCCGGAGGAGATGGCCAGCGATGAGATGAAGAAGCTGCGCGAGAAGTTCGTCAAGGAGGCCATCAACGATGCCCAGCTGGCCACCGTGCAGGGCACCAAGACCGATCTCCTCAAGTGCGCCAAGTGCAAGAAGCGCAACTGCACCTACAACCAGCTGCAGACTCGTTCCGCCGATGAACCTATGACCACCTTCGTCATGTGCAACGAGTGCGGCAACCGATGGAAGTTCTGC

CDS AA Sequence2

MSVEEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNNSSASKSTSAAKSSSSISGKDKSSSSSSSKDKEKKGSTSSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.