Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG3605 (FBgn0031493) cofactor
 
(-0.71/-3.98/0.62)

Factor activity

Additional information

CG3605 [FlyBase] | CG3605 [FlyMine] | CG3605 [BDGP]

H. sapiens orthologues1

SF3B2 (HGNC:10769, ENSG00000087365)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCGGACCAGTTGAACTACGAGCCCGGCCAACCCACGCCGCTCATGTCCATTCGCTTCGACCAGCAGCAGCACGAAAGTGCGGCGGCCAATGGAAATGAGAACGGCAATGGTAATGCCAATGGCGACGGCGATGCCTCCGAAGATGCTGTTGATGCCGAAAAAACGCCCGGAGAACTGGTCCTGCCCAAGGCCTTGGAGGACGTTCTGGCTTTGAAGGATCAAAGGGCAGCCGAGTTCACGGTGGACGCCGATTCGCAGGGTGGCAGTGGGGGTGCTACCCAGGACGGCGACGAAGCGGATGTGGGCGAGGACAGCGAGGAGGATGCGGATAACCAGGTGAACGGGAGTGCCAGCCAAAAGACCGGCAAGCAGAGCAAGGCGGAGCGTAACAAAAAGAAGAAGAAGCGAAAGAAGCAGAACAGGAAGATACGCCACCAGATTGAGTTCGCACGGCAGCAGCAGTTGGCCCAAGCGGAGGAGAACGAACCGGAGGCCAAGGACTCGGAGACAAAAGCCCATGGCAGCGAGGACGAACAGGTTGCCGAAAAGGAAAAGAAGGACAAACGCAAAGAGAGTCGCAGCAAGCGCAGGAAGGATCGTAGTGATGAGAAAGATACGGACAAAAAGGCTGGCGAGGCCAATGATGAAAATGTGACCATTGAATATGTGCCCGAAAAGATAACCATTGCCGATTTGGCGCCAATGTACCGCCAGTTTTATCGTGTGTTCGAAATCTTCAAGCTGGAAAACAAACCAAAGCCTGTGGAGAAGGACAAATCTTCGCACGATTCTGAGTCCCATCCCAGGGACAAAAAGGCTACAGACAAACAGCTCGAGGACGAGGACGATGACGGCGATGATGACGAAGAGCGCAAGGAAGACAAGGAGAAGCTGTCCAAGCGGAAACTTAAGAAACTGACCCGTTTGAGTGTGGCAGAACTGAAACAACTGGTCTCTCGACCTGACGTAGTGGAGATGCACGATGTCACAGCGAGAGATCCCAAACTACTGGTTCAACTGAAAGCCTATAGGAACACAGTACAAGTGCCGCGGCATTGGTGCTTCAAGCGAAAATATCTGCAGGGCAAAAGGGGTATTGAGAAGCCTCCGTTCGATCTCCCCGCCTTCATCAAAAAGACGGGCATCATGGAGATGCGCGAATCGTTGCAGGAACGAGAGGACGCCAAGACACTCAAGGCCAAGATGCGTGAACGCGTCCGTCCCAAGATGGGCAAAATTGACATTGACTACCAGAAACTTCACGATGCCTTCTTCAAGTGGCAGACCAAGCCCCGCATGACCATTCATGGCGACCTCTACTACGAGGGCAAGGAGTTTGAGACACGCCTTAAGGAAAAGAAGCCCGGAGATCTCTCCGAGGAGTTGCGCATTGCTCTGGGAATGCCCGTGGGACCCAACTCACACAAGATTCCGCCACCATGGCTCATTGCTCAACAGCGCTACGGGCCGCCGCCCTCGTATCCGAATCTTAAAATTCCTGGCCTGAATGCTCCGATCCCAGACGGAACCTCGTTCGGTTATCATGCCGGAGGTTGGGGCAAGCCGCCAGTGGATGAGAACGGAAAACCGCTGTACGGTGACGTATTTGGAACCAACATATTGGACCTTGATAATGGCGTAGACGAAGCTGACATTGAACGTAACCAATGGGGCGAACTGGAATCGGAGTCAGAAGAATCATCCGAGGAGGAAGAGGAAGATGGCGAGGACTTGGGCGATCAGCAGGATGAGACTGGCCTGGTAACGCCAGTAGAGGGACTAGTAACACCCTCTGGACTCACCAGTGTTCCAGCTGGCATGGAAACCCCCGAGAACATTGAGCTTCGCAAGAAGAAAATTGAAGCCGAGATGGAGGACAACGAAACTCCTGTTCTGTATCAAGTGCTGCCTGAGAAGCGCACCGACCGCATAGGGGCTTCCATGATGGGATCAACCCATGTCTACGACGTCAGTGGCAGTGGGGCTAACAAACAGCCCCCAGTTCGATCAACCACAGATCGCGAGGGCATTGTGGAACTGGCTCTCGATCCTAGCGAATTGGACTTGGACAATGACGCAATGGCCCAGCGTTATGAGCAACAAATGCGTGAGCAGCAGAATCACCTGCAAAAGGAGGATCTGTCAGACATGTTGGCCGAACATGTGGCGCGGCAGAAATCGAAGCGCAAGCGACAGCAAACGGATCCGGCCAAGACCACAAAGAAGTACAAGGAGTTCAAGTTT

CDS AA Sequence2

MADQLNYEPGQPTPLMSIRFDQQQHESAAANGNENGNGNANGDGDASEDAVDAEKTPGELVLPKALEDVLALKDQRAAEFTVDADSQGGSGGATQDGDEADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQAEENEPEAKDSETKAHGSEDEQVAEKEKKDKRKESRSKRRKDRSDEKDTDKKAGEANDENVTIEYVPEKITIADLAPMYRQFYRVFEIFKLENKPKPVEKDKSSHDSESHPRDKKATDKQLEDEDDDGDDDEERKEDKEKLSKRKLKKLTRLSVAELKQLVSRPDVVEMHDVTARDPKLLVQLKAYRNTVQVPRHWCFKRKYLQGKRGIEKPPFDLPAFIKKTGIMEMRESLQEREDAKTLKAKMRERVRPKMGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGDLSEELRIALGMPVGPNSHKIPPPWLIAQQRYGPPPSYPNLKIPGLNAPIPDGTSFGYHAGGWGKPPVDENGKPLYGDVFGTNILDLDNGVDEADIERNQWGELESESEESSEEEEEDGEDLGDQQDETGLVTPVEGLVTPSGLTSVPAGMETPENIELRKKKIEAEMEDNETPVLYQVLPEKRTDRIGASMMGSTHVYDVSGSGANKQPPVRSTTDREGIVELALDPSELDLDNDAMAQRYEQQMREQQNHLQKEDLSDMLAEHVARQKSKRKRQQTDPAKTTKKYKEFKF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.