Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
rib (FBgn0003254) TF
 
(-1.08/-3.71/-0.20)

Factor activity

Additional information

rib [FlyBase] | rib [FlyMine] | rib [BDGP]

H. sapiens orthologues1

None.

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGGCGGCCCAACGGCGCCGGTAGCCAGCAGTGGCGAGGTGGGACAGACGTACTGCCTCCGCTGGAACAACCACCAGACCAATCTGGTACAGATTCTACACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCAGCCTGGTGGTGGACGATGAACAGTTCCAGGCCCATCGCGTGGTTCTGGCGGCCAATTCACCGTATTTCCAGCACATCCTGAAGGATGTGCCGCAGGACCACTGCAGCATCATACTGCCGGGAGTGAAGGGCTTCGAGATTGCCGCTTTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATTCTGCGCACAGCCAAGGAGCTTCAGGTCAAGGGTCTGTACGACAACTTGATGAAGTTCAATCATGCCAGCGTCACGCCCACCTCCAGTTCGGGAGCTGGCGGAGCCAAGCCCCAGAACGGATCAGCATCCAACCACTCCTCATCCGTGATCTCCACATCCACGCACATCTCGCCCAGTGCCGCCATCTCGAGCAGCTGCTCGCCACCACCGCCGCCGCAGTTTGGCTATCAGCCGGGCTACAGCCATTATCCTCAGCAGCAGCCGATGTCGGCTAGTCAGATTCCGGCCGGTGAGGCTCCACTGACCCCCACCCAGGCCACACCCCACTCGGCGGCCTCGGGAGCGGGAGAAGCCGGTGGACAGTGGCCACTGACACCCTCCGCCGCCGCCGCCATGTTGAACTCTGTCTACGAATCAGCCGCCGATATGAATCCTCTCAAGCGCAAGAAGCTGTCGGCCATTTCAAGCATGCTTCTGAGTGGAAACCGCGACACACCCATCCTGAGAAACGTTCTGGCCCAAGCTAATCCCGCTGACTCCTCGCAACCCGGACCAATGAATGCCAATGGAGAGAAGACGCCCACTCATCCCCACCAGAACACCCAGCTTCCTGCCGGATTGGGAGTAAGTGGAGGCGAGCGCAACCACAGCTTCAATGGCTCCGACTACGGCGGCGACAAGGAACCACTTTCGCCCTACACAGATCGTTCCTTTGAAGAGGAGACCGGTCAGTCTGGCGGCAAGAAGCCGGAATGGAAGCGATACAAGCAGTATACCAGAGCGGATATGATGTGCGCCATCCAAGCGGTGAGGGAGGGAATGAGTGCCCTGCAGGCGAGCAGGAAGTACGGCCTGCCCAGTCGCACTCTCTACGACAAAGTCCGTAAGCTGAACATCACCACAGGACGTGGCACACACCGCACACCCAAGCGCAGCCCGCCGGGAGCTGAGTCCTCACAAGGTTTCTCCTATTCCGCTGCGGCAGCCGCTGCTGCACACAACTACGGTCATGGACATGGCCATCACTCGGAGGTGAAGCGTGATCAGAAGGTGGACCATGTGCCCGCCCATCACGGCATGCCGCCCACCATTCCACCCTCAGCTGCGGCCCTTCTGGATCACGCTTTCCTTCAGCAGGCTCTGGAGAACCGTGGTGGTGACATGGCCGGCCGAGAGGCTCTCCATGCCATGGCTCTGGCCGCAGCGGCCCATGCCGCTGCCAATCGCCTTTCCAGCAGTCCAGCGGAGATGGACCAGCGCTCCAATGGCCATGGCATGCGGTCGCCAAGTCCGCAAGGTCGTCACTACCCGCACGAGCAGGAGGCCATGGACTTGGAGATGGAGAAGCACGAGCAAAATATTATCAAGAGGGAACGCGACCAGGACGAACGTGAAGATGCGGACGATGAGGAGGATCATGAGCAAGAGCACGTGGAGGATCTCTCGCTGGCTAGAAAGGAGCGGCCACCATCGCCCTACTCGCCCCAGCCAACCGAGGCTGGTGCCGGCGTGATTATGCACGCCAGCAGTGCGTCCGCCAATGGCAAGGATCACGTGGACTACCCATCCTCGCCGCAGTTCGTTCCCATTGGTCTGAAGAGGGAGCTGATGGAAGGCGAGGACGCTCAGGCCCGGGCCGAC

CDS AA Sequence2

MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAGGAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEAGAGVIMHASSASANGKDHVDYPSSPQFVPIGLKRELMEGEDAQARAD

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.