Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
MED21 (FBgn0040020) cofactor
 
(-0.17/-2.30/0.35)

Factor activity

Additional information

MED21 [FlyBase] | MED21 [FlyMine] | MED21 [BDGP]

H. sapiens orthologues1

MED21 (HGNC:11473, ENSG00000152944)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCGGATCGGCTTACACAATTGCAAGACACCGTTAATCAGCAAGCGGAGCACTTCTGCAATGCTATTGGTGTAATTCAACAAACGTCCCTTCCAAGTAAATTTGTTAATTTTGAACGCATTGGACCCCAAACGCCAATCCCATGTCCGCCGCAAGAAGACTATGCCCAATTATTTGCACAGTTAATTGCACGATGTGCTAAAGACATCGACACCTTAATCGAGTCTCTTCCAAATGAAGACAGCTCCATTGAACTCCAAAATTCTAGCCTTAAGAGGCTCGAGATCGAAAACCAGGGAACTGCAAGAGACCTAGAGGAAGTAGTGCAAAAAGGCGAACTTTTGCTAGAAAAAATGCAGTATTCTTTGGAATGCATTGCTCAGGCTCAATTAGATATGCAAATAACACTCAAACATGATTTACAA

CDS AA Sequence2

MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPIPCPPQEDYAQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQGTARDLEEVVQKGELLLEKMQYSLECIAQAQLDMQITLKHDLQ

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.