Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
MED20 (FBgn0013531) cofactor
 
(-0.43/-2.89/0.16)

Factor activity

Additional information

MED20 [FlyBase] | MED20 [FlyMine] | MED20 [BDGP]

H. sapiens orthologues1

MED20 (HGNC:16840, ENSG00000124641)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGGAGTAACTATCCTTCAACCGTATCCCTTACCCGAAGGCAAATCGGGTGCCCACATAATCGATCAGCTGAGCAAGCGTCTGCTCGCCCTGGGCGCCACACATGCCGGTCAATTTCTGGTGGACTGCGAAACGTTCATCTCGACGCCACAGCCGCACAATGGAGCACCTGGACGCGCAGTCCACGTCCTGCACAACTCCGAGTATCCCGCCTCCACGTTCTCGATCATCGACAATGGCACCGGCAAACAAGTGGCCATTGTCGCCGACAATATCTTCGATCTGCTCATGCTCAAGATGACCAACACCTTCACCTCCAAAAAGCAGACCAAAATCGAGTCCCGTGGCGCTCGTTTCGAGTATGGTGACTTTGTTATCAAACTCGGTTCCGTCACCATGATGGAGCACTTCAAGGGCATCCTCATCGAAATCGAGTACAAGTCATGCGTGATTCTGGCCTACTGCTGGGAAATGATACGCGAAATGCTGCAGGGATTCCTCGGCATTGCTGTGAATAAGGACTTTCCCTCCTATTTCGCTCCACAGACAATAATGACGGCAATGGGGCAACAGCAGCTGCATGCCAAGCACAACGACATCTTTGAGCCAATGGACACCGTGAAACAATACCTGGAGCAGTTCACCAACTATAGGAAGCATGTGACTCTTATGGGCGGTATGGGCAGTGGACCGGGTAGCCAACAGGTTGGTCCGAACGTGCATATGTCGCCGGCGGTGGCGGGACTACATCGATCC

CDS AA Sequence2

MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETFISTPQPHNGAPGRAVHVLHNSEYPASTFSIIDNGTGKQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSYFAPQTIMTAMGQQQLHAKHNDIFEPMDTVKQYLEQFTNYRKHVTLMGGMGSGPGSQQVGPNVHMSPAVAGLHRS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.