Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
hbn (FBgn0008636) TF
 
(-0.89/-3.51/0.14)

Factor activity

Additional information

hbn [FlyBase] | hbn [FlyMine] | hbn [BDGP]

H. sapiens orthologues1

PHOX2B (HGNC:9143, ENSG00000109132), PHOX2A (HGNC:691, ENSG00000165462)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGATGACCACGACGACCTCGCAGCACCATCAGCACCATCCAATCATGCCGCCAGCCATGCGCCCCGCCCCCGTTCAGGAGAGTCCTGTCTCACGCCCCCGCGCCGTCTACAGCATCGATCAGATCCTGGGCAATCAGCACCAGATCAAGCGCAGTGATACACCCAGCGAAGTGCTGATTACGCATCCCCACCACGGCCATCCGCATCACATCCATCATTTGCACAGCAGCAATAGCAACGGCAGCAATCACTTGTCGCATCAGCAGCAGCAGCAGCACTCGCAACAGCAACACCATTCGCAGCAGCAGCAGCAGCAGCAACAATTGCAGGTTCAGGCCAAACGAGAGGACTCCCCAACGAATACGGACGGCGGCCTGGACGTGGATAACGACGACGAGCTGTCCTCCAGTCTGAACAATGGCCATGATCTCAGCGATATGGAGAGGCCGCGTAAAGTTCGAAGATCTCGCACAACATTTACAACATTTCAATTGCATCAGCTGGAGCGAGCCTTCGAGAAGACCCAGTATCCCGATGTTTTCACAAGGGAGGATCTGGCCATGCGATTGGATTTGAGCGAAGCACGCGTGCAGGTGTGGTTCCAGAACCGTCGGGCTAAATGGCGCAAACGTGAGAAGTTTATGAATCAGGACAAGGCCGGTTACCTTCTGCCCGAACAAGGTCTGCCGGAGTTTCCGCTGGGCATTCCCCTGCCGCCACATGGACTTCCGGGTCATCCGGGCTCGATGCAGTCGGAGTTCTGGCCCCCGCACTTTGCCCTCCACCAGCACTTTAATCCCGCTGCAGCCGCTGCCGCCGGCTTGCTGCCCCAGCACCTGATGGCGCCCCACTACAAGCTGCCCAACTTCCACACCCTGCTCTCCCAGTACATGGGCCTGAGCAATCTGAATGGGATCTTTGGCGCGGGAGCAGCTGCAGCAGCGGCGGCAGCATCGGCCGGCTATCCGCAGAATCTATCGCTGCACGCAGGACTCTCTGCGATGAGCCAAGTTAGCCCGCCGTGCAGCAACAGCAGTCCGCGCGAGAGTCCCAAGCTAGTGCCTCATCCCACACCGCCGCATGCCACGCCCCCAGCGGGCGGCAACGGAGGCGGCGGACTGCTAACGGGCGGACTGATCTCGACGGCCGCCCAATCGCCGAACAGCGCGGCAGGTGCCAGCAGCAACGCCTCCACACCCGTCTCCGTGGTCACCAAGGGCGAGGAC

CDS AA Sequence2

MMTTTTSQHHQHHPIMPPAMRPAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGHPHHIHHLHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVPHPTPPHATPPAGGNGGGGLLTGGLISTAAQSPNSAAGASSNASTPVSVVTKGED

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.