Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
dys (FBgn0039411) TF
 
(2.32/-0.20/4.06)

Factor activity

Additional information

dys [FlyBase] | dys [FlyMine] | dys [BDGP]

H. sapiens orthologues1

NPAS4 (HGNC:18983, ENSG00000174576)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTATGCGGATAATAAACGTGGCCTAGACAAGGTGACGGCAGCAACCCCGCCCACCCACGCCCTCCAGCAGCAGCAGCAGCAGCAACATCCCCACCAGCAGCAGCAGCATCTGCAGCATGTCCTGCAACTGCAGCAGCAACAGCAGCAACACCTTCAGCAGCAGCAACATCACTTGCAGCACCAGATGCATACGCATCATAACTTCCAGCAGCATGAAACGTCGCCAACAGTGTCGCAGCAGCAGCACATGCAACAGCAGCAGCCGCAGACGACACAACAGCAACATGCAACACAGCAACAGCAGCAGCAACAGCAACAGACAGCCGGCATGTTTACAAGATTCGATGCAAACAAATCGACGAAGGGCGCCTCGAAGATGCGACGCGATCTCATAAATGCGGAGATAGCCAATCTGAGGGATCTCCTGCCGCTGCCCCAATCGACGCGCCAGCGCCTCTCGCAACTGCAACTGATGGCCCTCGTTTGTGTCTATGTGCGGAAAGCCAACTACTTCCAGCAAGTTTTCAAACGTCACAATGCGATGCATCATCTCCATCATCAGACAGCAACACCAAATATTGGCTTCTCAAAGGCACTCTCCGGCTTCTTGATGATGCTCACACAAAATGGCAAATTGCTTTATATATCGGATAATGCTGCGGAGTACTTGGGCCATTCCATGGAGGATCTGCTGATACACGGTGACTCCGTTTACGATATCATTGACAAACAGGATCACGCAAACATCCAGGCCGAGCTGAATAGGAACGTGCCACCGCAGCCGGGTGGCTCGAGTCAGGCGAGCAGCGGTGGTGCCGGTGGTGCTGGCGGTGCCGGCGACTCAACGTCCAGCAATGGAAGTGCCGCTGGTGCCGGTGGTGCTGGTGGCGCCTCCAGTCTCGAGGGCGAGCATCGCATGTTCCTCTGTCGCATGAATGTTAGCCGCAATGCGCGACGGCAAATGCGTTTCGGCGATCAGAAGGTTGTCTTGGTCCAGGGTCACTATTTGTCATTCCTGCCGCTTTGCAGTCGCAACGAGCCCGTCTTTTTGGCCACCTGCACTCCGATTGCCATGCCCGAAACCAGGGAGTGTGTTGTACAAGGTGCCACCAACGTCTTCACCACCATCCATTCAATGGACATGAAAATAGCCCATATCGATAAAAATGGCGAATTTCATTTGGGCTATGATAAGTCGACTCTGCAAGGCACATCCTGGTACAATCTGATCCACAGCGATAATCTGACGGAGGCGCAAAAAAAACACAGTTTAATTATCCAATCGGAACAAGATCGCAGTTGTATCCTTCTAGTACGAATGCAGAGATCTAGTGGGGAATACACGTGGGTACACGTGGTTTTACAAGTGCGAGATAGTCCCGACTCCACGCAACAACCTGTTATCGTGTGCACAAACCAAGTACTCAACGATCGAGAGGCCTCAATTATGCTGGCCAACTCCTGGCTGTATCACTACTATACCGTCCAGTCGAAGATCCAGTTCGGCATGCCGCTGGACAGTGGTATCCGTGTCCCACCGGGAACTCCCTCCAGCGGCTACTACAGTCCCCATTCATCCCATCCACCGGCCACTCCAGGTGGTGCAACACCCAATTTGGGCATAGCCAGTAGCTTTGGCCCGCACCATCATCCACACCACTCGCACCACCCGCACCACCATCATCACCATCACCATCCGGCGACTGCTTACCATCACCATCCGCATATGGGAACCTATGGTGGAGTCTATCATGCGAAGGCAGCAATCGAGCTTAAGGAGGATCAACCGCTGTTTTGCTTTCAAGAGCCCGTGGACTATAGCCAAGTAAATAGCCACGTTAATCCTCCGAATGCAACAAGTACTCCCAATCCGCCTATCTCCAAATCGTCCACGCCCCCACCGCCCAAGAAGCGGGCTCGAAAACTGGAACCACTCTACTTACACGCCGAACGCTCTCCGGCGGCGGCGATAACTCCGGAACCGGATTGCTATGCCATCCATACTCATCCGGCTGCTGCCTATGCCACCTCATCGGTGGTCAGTAGTGATGCTTCAGTTATATATGCCACAATAGTGCCGACGAGACCGAGGTTACCCAATAAATCACTGCCTCCGGATCCTGCGGATTTTATAGAGCAATGGAACCCCAGTCCACCCTGGTCGGAATCGGCGCAAAAGGCTTCGTTGGATAGTTTTGGATCCTCCCACGAGCTGAGTCCCTGCATCACGACCACGCCCCCCACGCCCACAAGTGCTACACCGCATCAAAGTGGCTTGGGCACCACCCAGACCATAGGACCTGCTTTCAGTTTTGAATGGATGTCAGATCCTTTGGTACCGGTCACGTACCAGCAGTGGCCACCAACTGGTGACCATCATCAGCATCTTTCGCAGCACTTAAGCCAGAGTCAAAACCACCAAAATCCCCTCCAGCAGCAGCAGAACGAGCAGCTTCTACTTGGACAACAGCCGCATCTCCACCAGCAGCACCAGCACTTAGCACTTCATCATGGACGTGGGGAGCACTCCCTGGAGGGGGAAAGTCAGGGGGTGGTGGTAGTGCCACCGATACCCATTTCGATACCGATACCAACGGCCACGGGCCATGGGGATGCCGGCGAACCGGTTGAGGATAGAGATCCCAAAAAT

CDS AA Sequence2

MYADNKRGLDKVTAATPPTHALQQQQQQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQQQPQTTQQQHATQQQQQQQQQTAGMFTRFDANKSTKGASKMRRDLINAEIANLRDLLPLPQSTRQRLSQLQLMALVCVYVRKANYFQQVFKRHNAMHHLHHQTATPNIGFSKALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRNVPPQPGGSSQASSGGAGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRNARRQMRFGDQKVVLVQGHYLSFLPLCSRNEPVFLATCTPIAMPETRECVVQGATNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKHSLIIQSEQDRSCILLVRMQRSSGEYTWVHVVLQVRDSPDSTQQPVIVCTNQVLNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPHSSHPPATPGGATPNLGIASSFGPHHHPHHSHHPHHHHHHHHPATAYHHHPHMGTYGGVYHAKAAIELKEDQPLFCFQEPVDYSQVNSHVNPPNATSTPNPPISKSSTPPPPKKRARKLEPLYLHAERSPAAAITPEPDCYAIHTHPAAAYATSSVVSSDASVIYATIVPTRPRLPNKSLPPDPADFIEQWNPSPPWSESAQKASLDSFGSSHELSPCITTTPPTPTSATPHQSGLGTTQTIGPAFSFEWMSDPLVPVTYQQWPPTGDHHQHLSQHLSQSQNHQNPLQQQQNEQLLLGQQPHLHQQHQHLALHHGRGEHSLEGESQGVVVVPPIPISIPIPTATGHGDAGEPVEDRDPKN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.