Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Etl1 (FBgn0032157) cofactor
 
(-0.89/-3.84/-0.10)

Factor activity

Additional information

Etl1 [FlyBase] | Etl1 [FlyMine] | Etl1 [BDGP]

H. sapiens orthologues1

SMARCAD1 (HGNC:18398, ENSG00000163104)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCGGACAGCACAGTGGCCGCATCTGCGTCGGCCTCCGCCTCATCGTCCGCGAAGTCGAGCCTCAGCGATCTGCGTCAGTTCCGCATCAACAAGAATGCTTCCTCTGTCGTCGCTAGTCCTTCGAGAACTGAGCGTGTGCCTGGAAAGAAGCGCATCCAGGTGATGGCCGATAGTGACAGCGATGGCAACGACTCCCAGACGCCCAAGAAGACCAAACTGGAGCTGACCGTTAAGGAAAAGGAGGAGCGCTACATGGCAGCCGCCAAGATTTCGCCCCACTTTGACACAATGGCCATCCAGGAGTCTCTTTCCCGCACCAATTGGGATGTGGCCGCTTCCGTGCGATACCTAAGGGAGAACTGCAAGCCCAAGGGGCACAATGGACCACTGGCCAAGTCCAAGCTGAAACCCAGGTCAAACGGAATTAGTGGAGGCAACTTCTCGGATAACGACCATTCGGACGACGATGATGTGAAGCAGTCCAAGGACCAGGTGTATGATAGCGATGACAGCGATAGCGAGATGTCCACCAAGATGACGGGGCAACGTAAAAAAGTTTTCCAGTTTATGAACGAGGCTTCGCTAATTGAACTCCAGTCAGTTAAAACGCTGTCCGAGAAGAAGGCATTAGCCATCATTGATGTGCGACCATTTAGTGATTGGTCTGATTTGCGCCAAAAGCTGGAGAGCATCAGGATGTCGGGTGATCTTTTGAATTACGCTCAAGAGCTGATTAACAAACAGAACACGGTGGCCGCTATTCTAAGTAAGTGCAATAACATGGTGTCGCGTCTGGAGAAGGCGATTTCCAATGGTGCTGGCATTGTGGAGCAACCTAAGCTTCTTAGCAGCGGTCTACAGCTGGCTGATTATCAGATAATTGGCCTTAATTGGCTCACCGTAATGCACAAACAAGAAATGAATGGCATTTTGGCAGATGAAATGGGTCTGGGCAAGACAATTCAGGTTATTGCATTTCTGGCCTATCTAAAGGAGAATGGTCTTAGCCAGGCTGCACATTTAATTGTGGTGCCCTCGTCCACGCTGGATAATTGGGAGGCAGAGATTAGCCGCTGGTGTCCCGAACTGGTGGTGGAGAAGTACCATGGCTCGCAGGACGAGCGAAGGAGAATGCGAGGCCGCTTTGCCAAGGATGGATTTACCGGCTTTGATGTTCTTCTGACCACATATCACATTGTGGGATCCACGCCGGAGGAGAGGAAAATGTTCCGGGTTTGCAAGTTGGACTACGTCATTTTTGATGAAGCCCATATGCTGAAGAACATGACCACGCAACGCTATGCTAACCTTATAACCATAAACGCTAGGATGCGAATCCTGCTCACTGGAACTCCGCTGCAGAACAATCTGCTGGAGCTAATCTCTCTGCTCTGCTTCGTGATGCCCAAATTCTTTGCCAAGAGCATTGAGGACATAAAATCGTTGTTTGCTAAGAAGGGAAAAAGCGATGGAGATCAGGATGAGGTTTCACAGTTCCAGGAAACACAAATCCAGAGAGCAAAGCGTATCATGAAGCCATTTGTACTCAGACGGCTTAAGAAAGATGTCCTTAAGAGCCTGCCCAAGAAGCTAAGCCTGGTGGAAAAAGTGCCCATGAGCAGTCAACAGAAAATATACTATCACGAGCTGGTCGATTATTATTCCAATAACAAGGGCGAGGTGTGCAGCAGCAGCGAAAGGGCCGGCATAGCGATCATGATGGAGATGCGCCGCATTGCAAACCATCCGTTGCTGATGCGTCACTACTTCACCGACGCCAATCTACGTGGATTCTCTAAGCGCCTGGCTAATGCCAGTTCCTTTAAAAAGACCAACGAGCAATACATCTTTGAAGAGCTAGCCGTTATGTCAGACTTTCAGGTCTATCAGATGATGAACAAGCATGAGTTTTACGACGTGAAAATACCCGATAATTTGATATGCGATTCTGGAAAATTCCTCTACCTGGATACGTTGCTTCCAAAACTGAAGGCAGAAGGACACCGTGTGTTGCTTTTCAGCCAGTTCACCATGATGCTGGACATTGTGGAGGAGTATCTGCGAATACGAAAGTTTGGTTTCTGTCGCCTGGACGGGGCGACCGCCGTAAATGTCCGCCAGGATTTGATCACCGACTTCAATGGGGACGATAGCATCTTTGTGTTCCTACTCTCCACCAAAGCCGGTGGCGTTGGCATCAACCTGACGGCTGCCGACACCTGTGTCATTCACGATATCGACTTCAACCCGTACAACGATAAACAGGCCGAGGATCGGTGTCATCGCATGGGACAGCAGCGTCCGGTGACCATTTACCGTCTCATTTCCGAGAGTACCATCGAGGAGGGCATCCTGATGGCCGCCGAAGAGAAGCTAAAACTAGAAAAGGACATTACTTCCAACGAGAAGGGCGAGGTGCACGAGCAGCGATGTGTGGTCAAGCTGTTGACCACAGCCCTTGGCTTGGACAAGGATCAGGAGGAGCAGCTAAACAATTCACTAAACAACTCCATAGCCTCGCCCGCCAAA

CDS AA Sequence2

MSDSTVAASASASASSSAKSSLSDLRQFRINKNASSVVASPSRTERVPGKKRIQVMADSDSDGNDSQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSNGISGGNFSDNDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKSLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEEQLNNSLNNSIASPAK

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.