Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
salm (FBgn0261648) TF
 
(-1.26/-4.18/-0.24)

Factor activity

Additional information

salm [FlyBase] | salm [FlyMine] | salm [BDGP]

H. sapiens orthologues1

SALL1 (HGNC:10524, ENSG00000103449), SALL3 (HGNC:10527, ENSG00000256463), SALL4 (HGNC:15924, ENSG00000101115)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAAAAATCACCTGTCCAACGTTCTGTGTGCGATGCGTAGTGACTTCAAGGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACAGTGAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCTCGCAGCGCCGACAAAGACATCGGTAGCGATCAGGAGGAGAACGGTGGCTGCTCGCCACTGACCACGGCAACCACTACGGCCAGTCCCAGCCGAAGTCCCGAGCCGGAGGAGGAGCAGCCCGAGGAGCAGAGCACTTCAGAGCAGAGCATACCAGAGCAAAGCACACCAGACCACCAACTCGAGAACGATATCAAATCCGAGGCGAAATCAGAGATAGAGCCCGTTGAGGATAACAACAACAGAGTGGCGATGACAAAGCCCAGTTCCGAGGAGCGGGAACCGAATGCCAGTGGCTCCATGCCGAGTTCCCCAGTGGCGGAGGCCAGTGCCGAGGAGGCGGCCACCGAGAGGACACCGGAGAAGGAGAAGGAGAAGGACGTGGAGGTGGATGTGGAGAAGCCCGATGAGGCACCCAGCAGTGCGGTGCCCTCGACTGAGGTAACTCTGCCGGGCGGAGCGGGAGCTCCGGTCACCCTGGAGGCCATCCAGAATATGCAAATGGCCATTGCCCAGTTTGCGGCCAAGACCATTGCGAATGGTTCCAATGGAGCCGACAATGAGGCTGCCATGAAGCAGTTGGCCTTCCTTCAGCAAACCCTCTTCAATCTGCAGCAACAGCAGCTCTTCCAGATCCAGCTGATCCAACAGCTCCAGTCGCAGCTGGCGCTCAATCAGGCGAAACAGGAAGAGGATACCGAGGAGGATGCGGATCAGGAGCAAGATCAGGAACAGGAAACAGATACCTATGAGGAGGAGGAGCGCATCGCCGATATGGAACTGCGCCAGAAGGCGGAGGCCAGAATGGCGGAGGCTAAAGCGCGTCAGCATCTAATAAATGCTGGTGTTCCGCTGCGAGAGTCCTCCGGTTCTCCAGCTGAATCTCTGAAGCGAAGACGTGAGCATGATCACGAATCCCAGCCAAATCGTAGACCGAGTTTGGATAACACACACAAAGCAGATACGGCGCAGGATGCGCTGGCCAAGTTAAAGGAAATGGAGAACACACCACTGCCCTTCGGTTCCGATCTGGCCTCCAGCATTATCACCAACCATGATGATCTGCCCGAGCCGAATTCCCTGGATCTGCTCCAGAAACGTGCCCAGGAGGTGCTGGACTCTGCGTCGCAGGGAATCCTGGCCAACAGCATGGCTGACGACTTTGCCTTCGGTGAGAAATCGGGTGAGGGAAAGGGTCGCAATGAGCCGTTCTTCAAGCACCGCTGCAGGTACTGCGGGAAGGTCTTTGGCTCGGACTCGGCGCTCCAGATCCACATAAGATCGCATACTGGCGAGCGGCCATTTAAGTGCAATGTGTGCGGCAGTCGGTTCACCACCAAGGGCAACCTTAAGGTTCACTTTCAGCGGCATGCCCAAAAGTTCCCCCATGTGCCCATGAATGCCACGCCCATTCCGGAGCACATGGACAAGTTTCATCCGCCGCTGCTGGATCAAATGTCGCCCACGGATAGCTCTCCCAATCATTCCCCCGCCCCGCCCCCGTTGGGCTCTGCTCCGGCATCCTTTCCGCCCGCCTTCCCTGGCCTTCAGAATCTCTATCGCCCGCCTATGGAAATCCTTAAAAGTCTTGGAGCCGCTGCGCCGCACCAATACTTCCCTCAGGAGTTGCCCACGGATCTGAGAAAGCCATCGCCTCAATTGGATGAGGATGAGCCGCAGGTTAAGAACGAACCCGTCGAAGAGAAGGACCAGCGGGAGGAGCATGAACAGGAGATGGCAGAGTGCTCAGAGCCCGAGCCGGAACCGCTGCCCCTGGAGGTGCGCATCAAGGAGGAGCGTGTGGAGGAGCAGGAACAGGTTAAACAGGAGGACCATCGCATAGAGCCACGAAGGACACCCTCTCCTTCATCAGAGCACCGCTCCCCGCACCACCACCGTCACAGCCACATGGGCTATCCACCAGTGGTGCAGCCCATCCAACCGGCCGCACTTATGCATCCGCAATCTTCGCCGGGCTCGCAATCCCACCTGGATCACCTGCCCACACCGGGGCAATTGCCACCCCGCGAAGATTTCTTCGCTGAGCGTTTCCCCCTTAACTTTACCACCGCCAAGATGCTATCACCCGAACACCACTCTCCAGTAAGATCGCCCGCTGGCGGAGCACTTCCACCGGGTGTTCCACCACCACCGCACCACCACCCGCACCACATGGCCAGATCGCCGTTCTTTAACCCCATCAAGCACGAGATGGCCGCACTACTGCCCCGCCCGCACAGCAACGATAACTCGTGGGAGAACTTCATCGAGGTTTCGAACACCTGTGAGACCATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATTAGCGATCCCAATCAGTGTGTGGTCTGTGATCGGGTGTTATCCTGCAAGAGTGCCCTCCAGATGCACTACCGAACCCACACCGGTGAGCGCCCATTCAAGTGCAGGATCTGCGGCAGGGCATTCACCACCAAGGGCAACCTAAAGACCCACATGGCTGTGCACAAGATTCGTCCGCCGATGAGAAACTTCCACCAGTGCCCCGTTTGCCACAAGAAGTACTCGAATGCCCTGGTCCTGCAGCAGCACATCCGATTGCATACGGGTGAGCCCACTGATCTGACGCCGGAGCAAATCCAGGCGGCCGAGATCAGGGACCCGCCACCTTCGATGATGCCCGGTCACTTTATGAATCCCTTCGCAGCGGCTGCCTTCCATTTCGGTGCTCTTCCCGGCGGTCCAGGTGGTCCTCCGGGTCCGAATCATGGTGCCCACAATGGCGCCTTGGGATCGGAGTCGTCGCAGGGCGATATGGATGATAATATGGACTGCGGCGAGGACTACGACGATGATGTGTCGTCGGAGCACCTCTCGAATAGTAATCTCGAGCAGGAGGGCGACAGATCGCGCTCTGGTGATGACTTCAAGTCCCTGTTGTTCGAGCAAAAGCTGAGAATTGATGCCACCGGTGTGGTTAACACGAACCCCGTAAGACCGCGTTCCTCCGCCTCGAGTCATGGCCATTCGGTGGGCTCCACCTCTGCGCCCACCTCGCCCAGCGTACATGCATCATCCCAGGTTATCAAGCGCAGCTCTTCGCCCGCTCGTTCAGAGGCTTCTCAGGGAGCCCTGGACTTGACGCCCCGTGCTGCCCCCACATCGAGTTCCAGTTCGCGTTCTCCCCTGCCAAAGGAGAAGCCAGTCAGTCCGCCCAGCTTGCCTAGGAGTCCCAGTGGTTCTAGCCACGCCTCCGCCAACATACTGACCTCACCCCTGCCGCCCACCGTGGGCATTGACTGCTTGCCTCCCGGACTGCAACACCATTTGCAGCAGCAGCATCAGCACTTGATGCAACAACAGGCGGCAGTGGCAGCGGCAGCAGCTGCGCAGCACCATCATCACCAGCAAATGGCTGCACTGCATCAGCACCAGGAGCAACTGCGTCGCGAGGCAGCTGAAGCGCAGCAAAAGGCCGCAGCAGCTGCTGCAGCAGCGGCCGCAGCAGCCGCGGCCCAGCGACAAACACCGCCGCAAGCGCGCGATCAGCGGCAGGAAGGCGGACCGGGAGCGGGACCGCCGCCCAATCCGTTGATGGGCGCCCGCCCGCCCTTCGGCATGTTCCCCAACCTGCCGCTCTTCCCCCCCGCCACCACCCAGAACATGTGCAATGCGATGAACCAGATCGCCCAGTCCGTAATGCCGGCGGCTCCATTCAACCCACTGGCACTCAGCGGTGTTCGCGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTGGAGATCCACTACAGGAGCCACACCAAAGAGCGGCCATTCAAGTGCAGCATCTGTGATCGCGGCTTTACGACCAAGGGCAACCTGAAGCAACACATGCTAACTCATAAAATCCGCGATATGGAGCAAGAAACCTTCAGAAATCGTGCCGTAAAGTATATGAGTGAGTGGAACGAAGATCGCGAA

CDS AA Sequence2

MKNHLSNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSADKDIGSDQEENGGCSPLTTATTTASPSRSPEPEEEQPEEQSTSEQSIPEQSTPDHQLENDIKSEAKSEIEPVEDNNNRVAMTKPSSEEREPNASGSMPSSPVAEASAEEAATERTPEKEKEKDVEVDVEKPDEAPSSAVPSTEVTLPGGAGAPVTLEAIQNMQMAIAQFAAKTIANGSNGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQAKQEEDTEEDADQEQDQEQETDTYEEEERIADMELRQKAEARMAEAKARQHLINAGVPLRESSGSPAESLKRRREHDHESQPNRRPSLDNTHKADTAQDALAKLKEMENTPLPFGSDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANSMADDFAFGEKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPPAFPGLQNLYRPPMEILKSLGAAAPHQYFPQELPTDLRKPSPQLDEDEPQVKNEPVEEKDQREEHEQEMAECSEPEPEPLPLEVRIKEERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPPVVQPIQPAALMHPQSSPGSQSHLDHLPTPGQLPPREDFFAERFPLNFTTAKMLSPEHHSPVRSPAGGALPPGVPPPPHHHPHHMARSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTCETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGALPGGPGGPPGPNHGAHNGALGSESSQGDMDDNMDCGEDYDDDVSSEHLSNSNLEQEGDRSRSGDDFKSLLFEQKLRIDATGVVNTNPVRPRSSASSHGHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLPKEKPVSPPSLPRSPSGSSHASANILTSPLPPTVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQQMAALHQHQEQLRREAAEAQQKAAAAAAAAAAAAAAQRQTPPQARDQRQEGGPGAGPPPNPLMGARPPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSEWNEDRE

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.