Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Nop56 (FBgn0038964) cofactor
 
(-0.85/-4.23/0.19)

Factor activity

Additional information

Nop56 [FlyBase] | Nop56 [FlyMine] | Nop56 [BDGP]

H. sapiens orthologues1

NOP56 (HGNC:15911, ENSG00000101361)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCGAACCTGTATGTGCTGTACGAGCATGCGGCGGGCTTCTCGCTCTTCTCCGTCAAGGAGTTCGAAGAGGTGTCCATGTTCCTGCCCCAGGTGGAGTCCTCGGTGACGGACCTCGCCAAGTTCAACTCAATTGTTAAGCTGGCTGGATTTGCACCTTTCAAGACGGCCATTGCCGCACTGGAAAACATCAATGCCATATCCGAGGGCATAGTGCCGCAGGATCTGCTCTCCTTCTTGGATGACTTCTTTGCCAAGCTGAAGAAGAAGAAGTGCACCCTGGGTATTGCGGATGCCAAGCTGGGAGCTGCAATCACCGAGGCCATTGGCGTCCAGTGCAGTCACTTTGGAGTGGTTCCTGAGATTCTGCGCGGCGTGCGATTCCACTTCGCTAAGCTGGTCAAGGGATTCACCGACAAGTCCGCTGGCGTTGCTCAGCTGGGTCTGGGCCACAGCTACTCGCGTGCCAAGGTCAAGTTCAATGTTCATCGTTCCGACAACATGATCATCCAGTCGATTGCTTTGCTGGATCAGTTGGATAAGGACGTAAATACCTTCTCTATGCGGATACGCGAGTGGTACTCGTATCACTTCCCAGAACTGGTCAAAATCGTTCCCGACAATTACATGTTCGCCAAGGCGGCCAAGTTCATCAAGGATCGCAAGAACCTCACGCAAGACCAGCTGGAGGATCTTGAGAAGATCGTCATGGACTCCGCCAAGGCTCAGGCTATCATTGATGCCGCCAAGATGTCCATGGGCATGGACATCTCCATTGTTGATCTGATGAACATTGAGCTGTTCGCAGAGCGCGTTGTCAAGCTTTCCGAGTACCGAAAGAAACTGTCTACCTACTTGCACAACAAGATGAACTTGGTGGCACCCAATCTGCAGTCTTTGATTGGCGACCAGGTCGGTGCCCGCCTGATATCGCATGCCGGCAGCTTGACTAATCTGGCCAAGTACCCAGCATCTACAGTACAAATCCTGGGTGCCGAGAAGGCGCTCTTCCGTGCTCTAAAGACCCGCTCCAATACGCCCAAGTATGGTCTTATCTATCACTCCTCGTTCATTGGTCGAGCTGGCCTGAAGAACAAGGGTCGCATCTCTCGATTCCTGGCCAACAAGTGCTCCATCGCGTCGCGTATCGATTGCTTCCTGGAACAGCCGACTAGCGTGTTTGGCGAAACTCTTAAGCAACAGGTCGAAGATCGCCTCAAGTTCTACGAGTCCGGCGATGTGCCGCGCAAGAACATTGAGGTAATGAAGGAGGCCATCGAGGCAGCTGGTCAAGAGGCGGCAATCACTGTACAGTCCGAGAAAAAGAAGAAAAAGAAGAAGCGAGCGGCTGAAGACGAGGGCGAGACGAATGGCGCCAGTAATGGAAACGGAGCAGCCGCCGAGGCGGAAAATGGCAATGGCAACGATGATGGAGAGCCAAAGAAGAAGAAGAAAAAGAAGAACAAAAACAAGGAAGCGGTGGAGGCG

CDS AA Sequence2

MSNLYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENINAISEGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQPTSVFGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIEAAGQEAAITVQSEKKKKKKKRAAEDEGETNGASNGNGAAAEAENGNGNDDGEPKKKKKKKNKNKEAVEA

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.