Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Bzd (FBgn0011566) cofactor
 
(-0.48/-3.42/0.19)

Factor activity

Additional information

Bzd [FlyBase] | Bzd [FlyMine] | Bzd [BDGP]

H. sapiens orthologues1

SMYD3 (HGNC:15513)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCCACCGCCACCGTTGGTTCATCCAGATCCGCAACCACATCCGCAACCGCATCCGCATGCTCATCCAAATCCAAGAACCTAAAGAATCCGGCGCCGCAAATAAAAAGGGGACAGCGGATCCTCACGGAGAAACCATTCGCCTTCGTCTTGAAATCACAGTACCGCCTGGAGCGGTGCGATAACTGCCTGGAGGCGACCAAGGTGCTGAAGTGCTCCAACTGCAGGTATGTGTCCTACTGCCACCGCTCATGCCAGATGCAAGCTTGGGGCCAGCACAAGCACGAGTGTCCTTTCCTCAAGAAGGTGCATCCTCGAGTTGTGCCCGATGCTGCCCGAATGCTCTGCCGACTGATCCTGCGCCTGGAGCACGGCGGAGACCTGATCCGCGGCTATTACACCGAGCACGGCTCCCGCAAGTTTCGCGATCTCATGTCCCATTACGCCGAAATCAAGAACGATCCCATGCGACTGGAGCACTTGGACTCGCTGCATGCCGTCCTCACCGATATGATGGCCGAGAGTCCCAGCACGGTGCCAAACAAGACGGAACTGATGAGCATCTATGGTCGCCTGATCACCAATGGCTTCAATATCTTGGACGCCGAGATGAACTCAATTGCCACGGCCATATATCTGGGCGTCTCGATTACGGACCATAGCTGCCAGCCAAATGCGGTCGCCACCTTCGAGGGCAACGAGCTGCACGTCCACGCGATCGAGGACATGGAATGCCTGGACTGGTCGAAAATCTTCATCAGCTACATCGACCTGCTCAATACGCCGGAGCAGAGGCGTCTGGACCTCAAGGAGCACTACTACTTCCTATGCGTGTGCAGCAAGTGCACGGATGCCAAGGAATCGAAGGAGATGCTGGCTGCCCTGTGTCCCAATCGCAACTGCGGTGCGGGAATCAGTGTGGACCGCAATAATTGCCCGCGATGCGATGCCGGCATCAGTCCCAAGTTGAGAAATGCCTTCAACGAGGCGATGACTCTGACCCGGCACAATCTGGAGAACATGAAGGACGTGGCCTATCTCGATGTGTGCAAGGTGTGTCTGGACAAGCAGACTGGCGTGTTCCATCCCCTGAATGTGTGGTACGTCAAGACGCTCGATGCGGCCTTCGAAGCAGCCATCGAAGTGGGCAAGTGGAGCGACGCCCTGGATTACGGGCAACGTTTGCTACCAGGCTTTCGAAAATACCACGGACCCTGGAATCCGCTATTGGGCCTGCTTCACATGAAGCTGGGCAAGATTCAGCTCTACGAGGGCCATTCCAAGGAGGCACTGCACCATCTGGAGGAGGCCCAACGCATCCTAACCGTCACCCACGGCCGAGATCACAGACTGCTTACTGAGCAGCTATACATGCTCGTTCTACAAGCGCGACAAGAGGCGCAC

CDS AA Sequence2

MATATVGSSRSATTSATASACSSKSKNLKNPAPQIKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLKCSNCRYVSYCHRSCQMQAWGQHKHECPFLKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATAIYLGVSITDHSCQPNAVATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLENMKDVAYLDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYMLVLQARQEAH

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.